Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4728 and GFF4729 are separated by 58 nucleotides GFF4729 and GFF4730 are separated by 3 nucleotides
GFF4728 - Two-component system sensor histidine kinase, at 91,148 to 92,233
GFF4728
GFF4729 - no description, at 92,292 to 92,435
GFF4729
GFF4730 - hypothetical protein, at 92,439 to 94,712
GFF4730
Position (kb) 92
93 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 91.664 kb on + strand, within GFF4728 at 91.758 kb on + strand, within GFF4728 at 91.850 kb on + strand, within GFF4728 at 91.850 kb on + strand, within GFF4728 at 91.851 kb on - strand, within GFF4728 at 91.851 kb on - strand, within GFF4728 at 92.010 kb on + strand, within GFF4728 at 92.011 kb on - strand, within GFF4728 at 92.034 kb on + strand, within GFF4728 at 92.034 kb on + strand, within GFF4728 at 92.035 kb on - strand, within GFF4728 at 92.035 kb on - strand, within GFF4728 at 92.037 kb on + strand, within GFF4728 at 92.037 kb on + strand, within GFF4728 at 92.038 kb on - strand, within GFF4728 at 92.122 kb on - strand, within GFF4728 at 92.122 kb on - strand, within GFF4728 at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.148 kb on + strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.149 kb on - strand at 92.293 kb on + strand at 92.294 kb on - strand at 92.346 kb on + strand, within GFF4729 at 92.347 kb on - strand, within GFF4729 at 92.347 kb on - strand, within GFF4729 at 92.347 kb on - strand, within GFF4729 at 92.373 kb on - strand, within GFF4729 at 92.383 kb on + strand, within GFF4729 at 92.383 kb on + strand, within GFF4729 at 92.402 kb on + strand, within GFF4729 at 92.402 kb on + strand, within GFF4729 at 92.402 kb on + strand, within GFF4729 at 92.402 kb on + strand, within GFF4729 at 92.403 kb on - strand, within GFF4729 at 92.403 kb on - strand, within GFF4729 at 92.403 kb on - strand, within GFF4729 at 92.403 kb on - strand, within GFF4729 at 93.006 kb on + strand, within GFF4730 at 93.007 kb on - strand, within GFF4730 at 93.007 kb on - strand, within GFF4730 at 93.255 kb on + strand, within GFF4730 at 93.255 kb on + strand, within GFF4730 at 93.256 kb on - strand, within GFF4730 at 93.256 kb on - strand, within GFF4730 at 93.256 kb on - strand, within GFF4730 at 93.339 kb on + strand, within GFF4730 at 93.345 kb on + strand, within GFF4730 at 93.346 kb on - strand, within GFF4730 at 93.346 kb on - strand, within GFF4730 at 93.346 kb on - strand, within GFF4730
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 91,664 + GFF4728 0.48 +0.2 91,758 + GFF4728 0.56 -0.3 91,850 + GFF4728 0.65 +0.3 91,850 + GFF4728 0.65 -0.8 91,851 - GFF4728 0.65 -0.4 91,851 - GFF4728 0.65 -0.8 92,010 + GFF4728 0.79 -0.2 92,011 - GFF4728 0.79 +0.2 92,034 + GFF4728 0.82 +0.8 92,034 + GFF4728 0.82 -0.4 92,035 - GFF4728 0.82 -0.9 92,035 - GFF4728 0.82 -0.6 92,037 + GFF4728 0.82 -0.0 92,037 + GFF4728 0.82 -0.2 92,038 - GFF4728 0.82 -1.3 92,122 - GFF4728 0.90 -0.6 92,122 - GFF4728 0.90 -0.8 92,148 + +0.3 92,148 + -0.0 92,148 + +0.0 92,148 + +0.4 92,148 + +0.3 92,148 + -0.2 92,148 + +0.8 92,148 + +1.4 92,148 + +0.3 92,148 + -1.3 92,149 - +0.1 92,149 - -1.4 92,149 - -1.4 92,149 - -0.2 92,149 - -1.7 92,149 - +0.8 92,149 - +0.3 92,149 - +0.4 92,149 - -1.0 92,149 - -0.8 92,149 - -0.4 92,149 - -1.3 92,149 - -0.2 92,293 + +0.9 92,294 - -1.9 92,346 + GFF4729 0.38 -0.2 92,347 - GFF4729 0.38 +0.3 92,347 - GFF4729 0.38 -0.4 92,347 - GFF4729 0.38 +0.3 92,373 - GFF4729 0.56 -0.9 92,383 + GFF4729 0.63 +1.4 92,383 + GFF4729 0.63 -1.3 92,402 + GFF4729 0.76 -1.2 92,402 + GFF4729 0.76 -0.1 92,402 + GFF4729 0.76 -0.2 92,402 + GFF4729 0.76 -0.9 92,403 - GFF4729 0.77 -3.2 92,403 - GFF4729 0.77 -0.2 92,403 - GFF4729 0.77 -0.7 92,403 - GFF4729 0.77 -0.0 93,006 + GFF4730 0.25 +0.2 93,007 - GFF4730 0.25 +1.8 93,007 - GFF4730 0.25 -0.9 93,255 + GFF4730 0.36 -0.2 93,255 + GFF4730 0.36 -0.5 93,256 - GFF4730 0.36 -0.2 93,256 - GFF4730 0.36 +1.4 93,256 - GFF4730 0.36 -0.8 93,339 + GFF4730 0.40 -0.6 93,345 + GFF4730 0.40 +0.4 93,346 - GFF4730 0.40 -0.2 93,346 - GFF4730 0.40 -0.7 93,346 - GFF4730 0.40 -0.5
Or see this region's nucleotide sequence