Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4683 and GFF4684 are separated by 86 nucleotides GFF4684 and GFF4685 are separated by 4 nucleotides
GFF4683 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 41,700 to 44,015
GFF4683
GFF4684 - Na+/H+ antiporter, at 44,102 to 45,355
GFF4684
GFF4685 - Copper sensory histidine kinase CusS, at 45,360 to 46,688
GFF4685
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.669 kb on - strand, within GFF4683 at 43.669 kb on - strand, within GFF4683 at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.058 kb on - strand at 44.089 kb on + strand at 44.089 kb on + strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.097 kb on - strand at 44.402 kb on + strand, within GFF4684 at 44.403 kb on - strand, within GFF4684 at 44.403 kb on - strand, within GFF4684 at 44.465 kb on + strand, within GFF4684 at 45.512 kb on - strand, within GFF4685 at 45.678 kb on + strand, within GFF4685 at 45.679 kb on - strand, within GFF4685 at 45.757 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.303 kb on - strand, within GFF4685
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 43,332 + GFF4683 0.70 -1.5 43,332 + GFF4683 0.70 +0.1 43,332 + GFF4683 0.70 -0.3 43,332 + GFF4683 0.70 -0.7 43,332 + GFF4683 0.70 +0.7 43,332 + GFF4683 0.70 +0.2 43,332 + GFF4683 0.70 -0.4 43,332 + GFF4683 0.70 +0.1 43,333 - GFF4683 0.71 -1.1 43,333 - GFF4683 0.71 +0.0 43,333 - GFF4683 0.71 +0.2 43,333 - GFF4683 0.71 -0.3 43,333 - GFF4683 0.71 -0.4 43,333 - GFF4683 0.71 -0.4 43,669 - GFF4683 0.85 -0.1 43,669 - GFF4683 0.85 -0.3 44,057 + -0.0 44,057 + -0.3 44,057 + +0.6 44,057 + +1.2 44,057 + -0.5 44,058 - +1.0 44,089 + +0.3 44,089 + -0.2 44,090 - -0.6 44,090 - -0.2 44,090 - -0.4 44,090 - +1.2 44,090 - -0.7 44,090 - +1.2 44,097 - -0.6 44,402 + GFF4684 0.24 -0.5 44,403 - GFF4684 0.24 +0.2 44,403 - GFF4684 0.24 -1.3 44,465 + GFF4684 0.29 -0.0 45,512 - GFF4685 0.11 -0.3 45,678 + GFF4685 0.24 +0.2 45,679 - GFF4685 0.24 +0.2 45,757 + GFF4685 0.30 -0.8 46,027 + GFF4685 0.50 -0.2 46,027 + GFF4685 0.50 -0.2 46,027 + GFF4685 0.50 -0.8 46,027 + GFF4685 0.50 +0.8 46,027 + GFF4685 0.50 -0.4 46,028 - GFF4685 0.50 -0.4 46,028 - GFF4685 0.50 +0.9 46,028 - GFF4685 0.50 +0.1 46,028 - GFF4685 0.50 +0.0 46,028 - GFF4685 0.50 -1.0 46,028 - GFF4685 0.50 -0.7 46,028 - GFF4685 0.50 -1.1 46,028 - GFF4685 0.50 -0.5 46,303 - GFF4685 0.71 -0.7
Or see this region's nucleotide sequence