Strain Fitness in Variovorax sp. SCN45 around GFF4586

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
227,100	+		GFF4585	0.56	-0.6
227,100	+		GFF4585	0.56	+0.0
227,101	-		GFF4585	0.56	+0.2
227,325	-		GFF4585	0.80	-1.4
227,595	+				-0.3
227,595	+				+0.7
227,803	+		GFF4586	0.44	-1.3
227,803	+		GFF4586	0.44	+0.7
227,804	-		GFF4586	0.44	-2.1
227,869	+		GFF4586	0.58	-0.3
227,990	+		GFF4586	0.84	-0.3
227,990	+		GFF4586	0.84	-1.0
227,991	-		GFF4586	0.84	-1.3
228,025	+				+0.3
228,176	+		GFF4587	0.11	-0.2
228,176	+		GFF4587	0.11	+0.5
228,176	+		GFF4587	0.11	+0.1
228,177	-		GFF4587	0.11	-0.1
228,177	-		GFF4587	0.11	-0.4
228,284	+		GFF4587	0.24	+0.5
228,285	-		GFF4587	0.24	-0.1
228,285	-		GFF4587	0.24	+0.1