Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4506 and GFF4507 are separated by 7 nucleotides GFF4507 and GFF4508 are separated by 15 nucleotides GFF4508 and GFF4509 are separated by 92 nucleotides GFF4509 and GFF4510 are separated by 39 nucleotides
GFF4506 - hypothetical protein, at 149,629 to 150,090
GFF4506
GFF4507 - no description, at 150,098 to 150,547
GFF4507
GFF4508 - no description, at 150,563 to 151,051
GFF4508
GFF4509 - no description, at 151,144 to 151,398
GFF4509
GFF4510 - hypothetical protein, at 151,438 to 152,877
GFF4510
Position (kb) 150
151
152 Strain fitness (log2 ratio) -2
-1
0
1
2 at 149.606 kb on + strand at 149.645 kb on + strand at 149.646 kb on - strand at 149.646 kb on - strand at 149.818 kb on + strand, within GFF4506 at 149.818 kb on + strand, within GFF4506 at 149.818 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.978 kb on + strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 149.979 kb on - strand, within GFF4506 at 150.071 kb on + strand at 150.071 kb on + strand at 150.072 kb on - strand at 150.089 kb on - strand at 150.123 kb on + strand at 150.124 kb on - strand at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.164 kb on + strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.165 kb on - strand, within GFF4507 at 150.167 kb on - strand, within GFF4507 at 150.167 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.258 kb on - strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.261 kb on + strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.262 kb on - strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.275 kb on + strand, within GFF4507 at 150.276 kb on - strand, within GFF4507 at 150.276 kb on - strand, within GFF4507 at 150.560 kb on + strand at 150.560 kb on + strand at 150.560 kb on + strand at 150.560 kb on + strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.561 kb on - strand at 150.584 kb on + strand at 150.584 kb on + strand at 150.584 kb on + strand at 150.585 kb on - strand at 150.642 kb on + strand, within GFF4508 at 150.643 kb on - strand, within GFF4508 at 150.674 kb on + strand, within GFF4508 at 150.674 kb on + strand, within GFF4508 at 150.675 kb on - strand, within GFF4508 at 150.769 kb on - strand, within GFF4508 at 150.881 kb on + strand, within GFF4508 at 150.882 kb on - strand, within GFF4508 at 150.882 kb on - strand, within GFF4508 at 150.899 kb on + strand, within GFF4508 at 150.899 kb on + strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.900 kb on - strand, within GFF4508 at 150.923 kb on + strand, within GFF4508 at 150.924 kb on - strand, within GFF4508 at 151.171 kb on + strand, within GFF4509 at 151.171 kb on + strand, within GFF4509 at 151.171 kb on + strand, within GFF4509 at 151.172 kb on - strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.258 kb on + strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.259 kb on - strand, within GFF4509 at 151.307 kb on - strand, within GFF4509 at 151.388 kb on - strand at 151.458 kb on + strand at 151.458 kb on + strand at 151.518 kb on - strand at 151.766 kb on + strand, within GFF4510 at 151.766 kb on + strand, within GFF4510 at 151.766 kb on + strand, within GFF4510 at 151.767 kb on - strand, within GFF4510 at 151.928 kb on + strand, within GFF4510 at 151.928 kb on + strand, within GFF4510 at 151.928 kb on + strand, within GFF4510 at 151.928 kb on + strand, within GFF4510 at 151.968 kb on - strand, within GFF4510
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 149,606 + -0.7 149,645 + +0.9 149,646 - +0.9 149,646 - +0.2 149,818 + GFF4506 0.41 -0.2 149,818 + GFF4506 0.41 -0.1 149,818 + GFF4506 0.41 -0.2 149,978 + GFF4506 0.76 +0.3 149,978 + GFF4506 0.76 +0.2 149,978 + GFF4506 0.76 -0.4 149,978 + GFF4506 0.76 +0.6 149,978 + GFF4506 0.76 -0.6 149,978 + GFF4506 0.76 -0.3 149,978 + GFF4506 0.76 +0.1 149,978 + GFF4506 0.76 -0.7 149,978 + GFF4506 0.76 +0.2 149,978 + GFF4506 0.76 -0.8 149,978 + GFF4506 0.76 -0.3 149,978 + GFF4506 0.76 -1.6 149,978 + GFF4506 0.76 -0.1 149,978 + GFF4506 0.76 +0.1 149,979 - GFF4506 0.76 +0.4 149,979 - GFF4506 0.76 -1.4 149,979 - GFF4506 0.76 -0.1 149,979 - GFF4506 0.76 +0.2 149,979 - GFF4506 0.76 -0.8 149,979 - GFF4506 0.76 -0.7 149,979 - GFF4506 0.76 -0.6 149,979 - GFF4506 0.76 -0.4 149,979 - GFF4506 0.76 +1.0 150,071 + +0.9 150,071 + +0.1 150,072 - -0.5 150,089 - +0.4 150,123 + -0.5 150,124 - -0.6 150,164 + GFF4507 0.15 -0.8 150,164 + GFF4507 0.15 -1.3 150,164 + GFF4507 0.15 +0.0 150,164 + GFF4507 0.15 +0.3 150,165 - GFF4507 0.15 -0.3 150,165 - GFF4507 0.15 +0.2 150,165 - GFF4507 0.15 -0.6 150,165 - GFF4507 0.15 +0.5 150,165 - GFF4507 0.15 -1.0 150,165 - GFF4507 0.15 -0.6 150,167 - GFF4507 0.15 -0.4 150,167 - GFF4507 0.15 +0.5 150,258 - GFF4507 0.36 -0.6 150,258 - GFF4507 0.36 +0.3 150,258 - GFF4507 0.36 -0.5 150,261 + GFF4507 0.36 -0.8 150,261 + GFF4507 0.36 +0.0 150,261 + GFF4507 0.36 +0.6 150,262 - GFF4507 0.36 +0.6 150,262 - GFF4507 0.36 -0.3 150,262 - GFF4507 0.36 -0.3 150,275 + GFF4507 0.39 -0.6 150,275 + GFF4507 0.39 +0.5 150,275 + GFF4507 0.39 +0.4 150,275 + GFF4507 0.39 +0.5 150,275 + GFF4507 0.39 -0.1 150,276 - GFF4507 0.40 -1.3 150,276 - GFF4507 0.40 +0.5 150,560 + +1.7 150,560 + -0.4 150,560 + -0.9 150,560 + -0.1 150,561 - +0.0 150,561 - -0.0 150,561 - -0.2 150,561 - -0.3 150,561 - -0.4 150,561 - +2.2 150,584 + -0.8 150,584 + -0.3 150,584 + -0.4 150,585 - +0.5 150,642 + GFF4508 0.16 +0.2 150,643 - GFF4508 0.16 +0.2 150,674 + GFF4508 0.23 +0.2 150,674 + GFF4508 0.23 -0.8 150,675 - GFF4508 0.23 -0.4 150,769 - GFF4508 0.42 -0.8 150,881 + GFF4508 0.65 +0.7 150,882 - GFF4508 0.65 -0.7 150,882 - GFF4508 0.65 +0.3 150,899 + GFF4508 0.69 -0.4 150,899 + GFF4508 0.69 -0.3 150,900 - GFF4508 0.69 -0.6 150,900 - GFF4508 0.69 -0.5 150,900 - GFF4508 0.69 -1.8 150,923 + GFF4508 0.74 -0.7 150,924 - GFF4508 0.74 -0.5 151,171 + GFF4509 0.11 -0.0 151,171 + GFF4509 0.11 -0.7 151,171 + GFF4509 0.11 -2.3 151,172 - GFF4509 0.11 +0.2 151,258 + GFF4509 0.45 -0.9 151,258 + GFF4509 0.45 +0.8 151,258 + GFF4509 0.45 -0.8 151,258 + GFF4509 0.45 -0.5 151,258 + GFF4509 0.45 -0.4 151,259 - GFF4509 0.45 -0.7 151,259 - GFF4509 0.45 +0.0 151,259 - GFF4509 0.45 -0.1 151,259 - GFF4509 0.45 -0.1 151,259 - GFF4509 0.45 -0.3 151,259 - GFF4509 0.45 -0.8 151,307 - GFF4509 0.64 -0.8 151,388 - +0.2 151,458 + +0.2 151,458 + -0.1 151,518 - -0.2 151,766 + GFF4510 0.23 -0.1 151,766 + GFF4510 0.23 -0.1 151,766 + GFF4510 0.23 +0.1 151,767 - GFF4510 0.23 +0.3 151,928 + GFF4510 0.34 -0.1 151,928 + GFF4510 0.34 +0.2 151,928 + GFF4510 0.34 -1.8 151,928 + GFF4510 0.34 +0.1 151,968 - GFF4510 0.37 -0.8
Or see this region's nucleotide sequence