Strain Fitness in Variovorax sp. SCN45 around GFF4309

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
228,698	+		GFF4308	0.45	-2.6
228,699	-		GFF4308	0.45	-0.4
228,704	+		GFF4308	0.45	+0.1
228,704	+		GFF4308	0.45	+0.1
228,864	+		GFF4308	0.59	+1.1
228,864	+		GFF4308	0.59	-1.6
228,875	+		GFF4308	0.59	+1.0
228,875	+		GFF4308	0.59	-0.2
229,022	+		GFF4308	0.72	-0.3
229,022	-		GFF4308	0.72	-0.7
229,119	-		GFF4308	0.80	+0.5
229,304	+				+1.0
229,304	+				-0.8
229,305	-				-0.1
229,305	-				-0.1
229,310	+				-0.4
229,311	-				-0.5
229,867	+		GFF4309	0.60	-0.9
229,867	+		GFF4309	0.60	-1.1
229,868	-		GFF4309	0.60	+0.7
230,016	+		GFF4309	0.78	-1.2
230,315	+				+0.5
230,315	+				+0.0
230,316	-				+3.3
230,316	-				-0.7
231,131	+		GFF4310	0.50	-1.1