Strain Fitness in Variovorax sp. SCN45 around GFF4218

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
131,707	+		GFF4217	0.25	+0.2
131,707	+		GFF4217	0.25	-1.6
132,593	+				-0.6
132,594	-				+0.5
132,594	-				+1.0
132,594	-				-0.8
132,594	-				-0.4
132,600	+				-0.6
132,600	+				-1.2
132,601	-				-0.7
132,696	+		GFF4218	0.71	-1.2
132,696	+		GFF4218	0.71	-0.8
132,696	+		GFF4218	0.71	-0.6
132,696	+		GFF4218	0.71	-1.4
132,697	-		GFF4218	0.72	-0.3
132,697	-		GFF4218	0.72	-1.2
132,697	-		GFF4218	0.72	-1.5
132,773	+				+0.1
132,774	-				+0.7