Strain Fitness in Variovorax sp. SCN45 around GFF4199

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
113,384	+		GFF4198	0.11	-0.0
113,504	+		GFF4198	0.22	-0.1
113,700	-		GFF4198	0.40	+0.1
113,711	+		GFF4198	0.41	-1.0
113,715	-		GFF4198	0.42	-1.1
113,985	-		GFF4198	0.66	-0.7
114,009	-		GFF4198	0.68	-0.2
114,198	-		GFF4198	0.86	-0.1
114,198	-		GFF4198	0.86	-0.7
114,851	+		GFF4199	0.51	+0.5
114,852	-		GFF4199	0.51	-1.4
114,863	+		GFF4199	0.52	+0.7
114,863	+		GFF4199	0.52	-0.1
114,863	+		GFF4199	0.52	+1.7
114,863	+		GFF4199	0.52	+0.7
114,864	-		GFF4199	0.52	+1.7
115,833	+		GFF4200	0.43	-1.1
115,833	+		GFF4200	0.43	+0.2
115,833	+		GFF4200	0.43	-0.2
115,833	+		GFF4200	0.43	+0.0
115,833	+		GFF4200	0.43	-0.2
115,834	-		GFF4200	0.43	+0.7
115,834	-		GFF4200	0.43	-1.1
115,834	-		GFF4200	0.43	+0.2
115,834	-		GFF4200	0.43	+0.5
115,834	-		GFF4200	0.43	-2.4
115,847	+		GFF4200	0.44	+0.8
115,847	+		GFF4200	0.44	-0.5