Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4090 and GFF4091 are separated by 0 nucleotides GFF4091 and GFF4092 are separated by 59 nucleotides GFF4092 and GFF4093 are separated by 39 nucleotides GFF4093 and GFF4094 are separated by 109 nucleotides
GFF4090 - Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4), at 302,611 to 303,300
GFF4090
GFF4091 - Glutamate/aspartate ABC transporter, ATP-binding protein GltL (TC 3.A.1.3.4), at 303,301 to 304,044
GFF4091
GFF4092 - Copper tolerance protein, at 304,104 to 304,604
GFF4092
GFF4093 - no description, at 304,644 to 304,946
GFF4093
GFF4094 - no description, at 305,056 to 306,099
GFF4094
Position (kb) 304
305 Strain fitness (log2 ratio) -1
0
1
2 at 303.206 kb on - strand, within GFF4090 at 303.206 kb on - strand, within GFF4090 at 303.206 kb on - strand, within GFF4090 at 303.340 kb on + strand at 303.341 kb on - strand at 303.496 kb on - strand, within GFF4091 at 303.525 kb on - strand, within GFF4091 at 304.283 kb on + strand, within GFF4092 at 304.284 kb on - strand, within GFF4092 at 304.455 kb on + strand, within GFF4092 at 304.551 kb on + strand, within GFF4092 at 304.646 kb on - strand at 304.655 kb on - strand at 304.814 kb on - strand, within GFF4093 at 304.828 kb on + strand, within GFF4093 at 304.906 kb on + strand, within GFF4093 at 304.907 kb on - strand, within GFF4093 at 304.935 kb on - strand at 305.059 kb on + strand at 305.060 kb on - strand at 305.060 kb on - strand at 305.060 kb on - strand at 305.073 kb on + strand at 305.073 kb on + strand at 305.074 kb on - strand at 305.157 kb on - strand at 305.193 kb on - strand, within GFF4094 at 305.231 kb on + strand, within GFF4094 at 305.231 kb on + strand, within GFF4094 at 305.232 kb on - strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.370 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.543 kb on + strand, within GFF4094
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 303,206 - GFF4090 0.86 +1.0 303,206 - GFF4090 0.86 -0.8 303,206 - GFF4090 0.86 -0.4 303,340 + -0.9 303,341 - +0.6 303,496 - GFF4091 0.26 -0.9 303,525 - GFF4091 0.30 -0.8 304,283 + GFF4092 0.36 +0.4 304,284 - GFF4092 0.36 -0.7 304,455 + GFF4092 0.70 -1.5 304,551 + GFF4092 0.89 -1.7 304,646 - +0.1 304,655 - +0.4 304,814 - GFF4093 0.56 +0.6 304,828 + GFF4093 0.61 -0.3 304,906 + GFF4093 0.86 +1.0 304,907 - GFF4093 0.87 -0.2 304,935 - +1.6 305,059 + +0.9 305,060 - +2.0 305,060 - -0.4 305,060 - -0.1 305,073 + -1.0 305,073 + +0.1 305,074 - -0.2 305,157 - +0.6 305,193 - GFF4094 0.13 -0.4 305,231 + GFF4094 0.17 +0.5 305,231 + GFF4094 0.17 -0.4 305,232 - GFF4094 0.17 +0.9 305,369 + GFF4094 0.30 +0.3 305,369 + GFF4094 0.30 +0.4 305,369 + GFF4094 0.30 -1.2 305,370 - GFF4094 0.30 -0.6 305,394 - GFF4094 0.32 +0.8 305,394 - GFF4094 0.32 -0.6 305,543 + GFF4094 0.47 -0.3
Or see this region's nucleotide sequence