Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2413 and GFF2414 are separated by 38 nucleotides GFF2414 and GFF2415 are separated by 12 nucleotides GFF2415 and GFF2416 are separated by 92 nucleotides
GFF2413 - hypothetical protein, at 464,656 to 465,636
GFF2413
GFF2414 - Cell division protein FtsW, at 465,675 to 466,202
GFF2414
GFF2415 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 466,215 to 466,979
GFF2415
GFF2416 - Transcriptional regulator YbhD, LysR family, at 467,072 to 467,983
GFF2416
Position (kb) 465
466
467 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 464.995 kb on + strand, within GFF2413 at 465.040 kb on + strand, within GFF2413 at 465.220 kb on + strand, within GFF2413 at 465.299 kb on - strand, within GFF2413 at 465.532 kb on + strand, within GFF2413 at 465.533 kb on - strand, within GFF2413 at 465.587 kb on - strand at 465.642 kb on + strand at 465.642 kb on + strand at 465.642 kb on + strand at 465.642 kb on + strand at 465.643 kb on - strand at 465.643 kb on - strand at 465.643 kb on - strand at 466.116 kb on + strand, within GFF2414 at 466.116 kb on + strand, within GFF2414 at 466.116 kb on + strand, within GFF2414 at 466.117 kb on - strand, within GFF2414 at 466.117 kb on - strand, within GFF2414 at 466.306 kb on + strand, within GFF2415 at 466.306 kb on + strand, within GFF2415 at 466.306 kb on + strand, within GFF2415 at 466.307 kb on - strand, within GFF2415 at 466.307 kb on - strand, within GFF2415 at 466.307 kb on - strand, within GFF2415 at 466.355 kb on - strand, within GFF2415 at 466.355 kb on - strand, within GFF2415 at 466.420 kb on + strand, within GFF2415 at 466.420 kb on + strand, within GFF2415 at 466.420 kb on + strand, within GFF2415 at 466.420 kb on + strand, within GFF2415 at 466.420 kb on + strand, within GFF2415 at 466.421 kb on - strand, within GFF2415 at 466.421 kb on - strand, within GFF2415 at 466.423 kb on + strand, within GFF2415 at 466.423 kb on + strand, within GFF2415 at 466.423 kb on + strand, within GFF2415 at 466.423 kb on + strand, within GFF2415 at 466.424 kb on - strand, within GFF2415 at 466.424 kb on - strand, within GFF2415 at 466.424 kb on - strand, within GFF2415 at 466.424 kb on - strand, within GFF2415 at 466.437 kb on + strand, within GFF2415 at 466.438 kb on - strand, within GFF2415 at 466.438 kb on - strand, within GFF2415 at 466.438 kb on - strand, within GFF2415 at 466.474 kb on + strand, within GFF2415 at 466.475 kb on - strand, within GFF2415 at 466.477 kb on + strand, within GFF2415 at 466.958 kb on - strand at 467.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 464,995 + GFF2413 0.35 +1.0 465,040 + GFF2413 0.39 -1.9 465,220 + GFF2413 0.57 +0.2 465,299 - GFF2413 0.66 -0.9 465,532 + GFF2413 0.89 +1.2 465,533 - GFF2413 0.89 +0.0 465,587 - -0.3 465,642 + -0.2 465,642 + -1.2 465,642 + +1.7 465,642 + -0.5 465,643 - -1.0 465,643 - -0.2 465,643 - -0.3 466,116 + GFF2414 0.84 +0.7 466,116 + GFF2414 0.84 +0.5 466,116 + GFF2414 0.84 +0.4 466,117 - GFF2414 0.84 +1.7 466,117 - GFF2414 0.84 -0.8 466,306 + GFF2415 0.12 -0.5 466,306 + GFF2415 0.12 -0.7 466,306 + GFF2415 0.12 +0.5 466,307 - GFF2415 0.12 -2.2 466,307 - GFF2415 0.12 -2.8 466,307 - GFF2415 0.12 +0.2 466,355 - GFF2415 0.18 +2.7 466,355 - GFF2415 0.18 +0.1 466,420 + GFF2415 0.27 -0.6 466,420 + GFF2415 0.27 -0.9 466,420 + GFF2415 0.27 +1.9 466,420 + GFF2415 0.27 +1.7 466,420 + GFF2415 0.27 -1.3 466,421 - GFF2415 0.27 +0.1 466,421 - GFF2415 0.27 -0.0 466,423 + GFF2415 0.27 -3.1 466,423 + GFF2415 0.27 +0.1 466,423 + GFF2415 0.27 +1.7 466,423 + GFF2415 0.27 -0.6 466,424 - GFF2415 0.27 +1.7 466,424 - GFF2415 0.27 -0.4 466,424 - GFF2415 0.27 -0.7 466,424 - GFF2415 0.27 +0.3 466,437 + GFF2415 0.29 -0.0 466,438 - GFF2415 0.29 -0.2 466,438 - GFF2415 0.29 +0.1 466,438 - GFF2415 0.29 -0.2 466,474 + GFF2415 0.34 -1.2 466,475 - GFF2415 0.34 -0.1 466,477 + GFF2415 0.34 -0.2 466,958 - +0.4 467,035 - -0.4
Or see this region's nucleotide sequence