Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1894 and GFF1895 are separated by 51 nucleotides GFF1895 and GFF1896 are separated by 21 nucleotides GFF1896 and GFF1897 overlap by 4 nucleotides
GFF1894 - no description, at 569,547 to 569,975
GFF1894
GFF1895 - Aminoglycoside N(6')-acetyltransferase (EC 2.3.1.82) => AAC(6')-Ic,f,g,h,j,k,l,r-z / Uncharacterized hydrolase, at 570,027 to 570,536
GFF1895
GFF1896 - Two-component transcriptional response regulator, LuxR family, at 570,558 to 571,172
GFF1896
GFF1897 - Two-component system sensor histidine kinase/response regulator hybrid, at 571,169 to 573,343
GFF1897
Position (kb) 570
571
572 Strain fitness (log2 ratio) -2
-1
0
1 at 569.882 kb on + strand, within GFF1894 at 569.959 kb on + strand at 569.959 kb on + strand at 569.959 kb on + strand at 569.959 kb on + strand at 569.959 kb on + strand at 569.959 kb on + strand at 569.960 kb on - strand at 569.960 kb on - strand at 569.960 kb on - strand at 569.960 kb on - strand at 569.960 kb on - strand at 569.960 kb on - strand at 569.961 kb on + strand at 569.961 kb on + strand at 569.961 kb on + strand at 569.961 kb on + strand at 569.961 kb on + strand at 569.961 kb on + strand at 569.962 kb on - strand at 569.962 kb on - strand at 569.962 kb on - strand at 569.962 kb on - strand at 569.962 kb on - strand at 569.962 kb on - strand at 569.969 kb on - strand at 569.992 kb on + strand at 569.992 kb on + strand at 570.158 kb on - strand, within GFF1895 at 570.298 kb on + strand, within GFF1895 at 570.298 kb on + strand, within GFF1895 at 570.559 kb on + strand at 570.645 kb on + strand, within GFF1896 at 571.084 kb on + strand, within GFF1896 at 571.659 kb on - strand, within GFF1897 at 571.912 kb on + strand, within GFF1897 at 571.975 kb on - strand, within GFF1897 at 572.065 kb on - strand, within GFF1897
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 569,882 + GFF1894 0.78 +0.8 569,959 + +0.1 569,959 + -0.4 569,959 + -1.4 569,959 + +0.5 569,959 + +0.8 569,959 + +0.8 569,960 - -0.4 569,960 - +0.4 569,960 - -0.4 569,960 - +0.6 569,960 - -0.1 569,960 - -0.9 569,961 + -0.8 569,961 + +0.1 569,961 + -0.1 569,961 + -1.0 569,961 + +0.6 569,961 + -0.8 569,962 - +0.3 569,962 - -1.0 569,962 - -0.7 569,962 - -0.3 569,962 - -0.3 569,962 - -2.1 569,969 - +0.2 569,992 + -0.5 569,992 + +0.7 570,158 - GFF1895 0.26 -1.1 570,298 + GFF1895 0.53 +1.4 570,298 + GFF1895 0.53 -1.8 570,559 + +0.0 570,645 + GFF1896 0.14 -0.9 571,084 + GFF1896 0.86 +0.2 571,659 - GFF1897 0.23 +0.5 571,912 + GFF1897 0.34 -0.9 571,975 - GFF1897 0.37 -0.1 572,065 - GFF1897 0.41 -0.1
Or see this region's nucleotide sequence