Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS16980

Experiment: Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)
112,838	+		HMPREF1181_RS16975	0.35	-1.1
112,926	+		HMPREF1181_RS16975	0.42	+0.3
112,927	-		HMPREF1181_RS16975	0.42	+2.2
113,109	-		HMPREF1181_RS16975	0.56	+0.9
113,109	-		HMPREF1181_RS16975	0.56	+1.1
113,357	+		HMPREF1181_RS16975	0.76	-2.1
113,358	-		HMPREF1181_RS16975	0.76	+2.5
113,390	+		HMPREF1181_RS16975	0.78	+0.2
113,391	-		HMPREF1181_RS16975	0.79	+1.1
113,393	-		HMPREF1181_RS16975	0.79	+0.5
113,509	+		HMPREF1181_RS16975	0.88	-0.9
113,513	+		HMPREF1181_RS16975	0.88	-1.3
113,514	-		HMPREF1181_RS16975	0.88	+1.7
113,699	+				-0.9
113,702	-				+0.2
113,702	-				+0.9
113,705	-				+1.1
113,712	+				+1.1
113,712	-				+2.1
113,722	+				+2.0
113,792	+				+1.7
113,937	+		HMPREF1181_RS16980	0.24	+1.0
114,001	-		HMPREF1181_RS16980	0.30	+2.0
114,070	-		HMPREF1181_RS16980	0.37	-0.5
114,083	-		HMPREF1181_RS16980	0.39	+1.6
114,190	-		HMPREF1181_RS16980	0.50	+1.1
114,230	-		HMPREF1181_RS16980	0.54	+1.7
114,237	+		HMPREF1181_RS16980	0.55	+2.2
114,238	-		HMPREF1181_RS16980	0.55	+1.1
114,238	-		HMPREF1181_RS16980	0.55	+1.6
114,238	-		HMPREF1181_RS16980	0.55	-0.7
114,621	-				+1.4
114,623	-				+0.7
114,730	+				+1.0
114,748	+				+1.1
114,797	-				-0.4
114,814	+				-1.3
114,852	+				+0.2
115,042	+		HMPREF1181_RS16985	0.26	+0.2
115,119	-		HMPREF1181_RS16985	0.33	-0.3
115,167	+		HMPREF1181_RS16985	0.37	-0.5
115,168	-		HMPREF1181_RS16985	0.37	+0.6
115,363	-		HMPREF1181_RS16985	0.55	-0.3
115,410	-		HMPREF1181_RS16985	0.59	-0.6
115,449	-		HMPREF1181_RS16985	0.63	-0.5
115,660	-		HMPREF1181_RS16985	0.81	+1.0