Strain Fitness in Variovorax sp. SCN45 around GFF848

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
156,070	+				-0.0
156,071	-				-1.3
156,121	+		GFF847	0.16	-0.8
156,121	+		GFF847	0.16	-2.6
156,122	-		GFF847	0.16	-0.3
156,122	-		GFF847	0.16	-0.1
156,122	-		GFF847	0.16	-0.4
156,181	+		GFF847	0.27	-0.6
156,182	-		GFF847	0.28	-0.1
156,184	+		GFF847	0.28	+0.6
156,185	-		GFF847	0.28	-0.1
156,615	-		GFF848	0.11	+0.4
156,656	+		GFF848	0.20	-0.9
156,656	+		GFF848	0.20	-1.8
156,657	-		GFF848	0.20	-1.1
156,657	-		GFF848	0.20	-2.0
156,657	-		GFF848	0.20	-0.9
156,657	-		GFF848	0.20	+0.4
156,690	+		GFF848	0.27	+1.1
156,691	-		GFF848	0.28	-0.3
156,768	-		GFF848	0.45	+0.8
157,296	+				+1.1
157,518	+		GFF849	0.21	+1.1
157,518	+		GFF849	0.21	-0.5
157,620	+		GFF849	0.26	+0.4
157,621	-		GFF849	0.27	-0.1
157,621	-		GFF849	0.27	-1.3