Strain Fitness in Variovorax sp. SCN45 around GFF6957

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
31,637	-		GFF6956	0.74	-1.0
31,863	+				+0.4
32,184	+		GFF6957	0.26	-0.6
32,185	-		GFF6957	0.26	+0.0
32,341	-		GFF6957	0.37	-1.2
32,346	+		GFF6957	0.37	+0.5
32,347	-		GFF6957	0.37	-1.7
32,466	+		GFF6957	0.46	+0.3
32,466	+		GFF6957	0.46	+2.2
32,467	-		GFF6957	0.46	-0.1
32,473	-		GFF6957	0.46	-2.6
32,556	+		GFF6957	0.52	-1.6
32,557	-		GFF6957	0.52	+0.5
32,931	+		GFF6957	0.79	+0.0
32,931	+		GFF6957	0.79	-1.4
32,931	+		GFF6957	0.79	+0.4
32,991	+		GFF6957	0.83	+0.7
32,991	+		GFF6957	0.83	+1.8
32,991	+		GFF6957	0.83	-3.3
32,991	+		GFF6957	0.83	-0.8
32,994	+		GFF6957	0.83	+0.1
33,027	+		GFF6957	0.86	-0.5
33,027	+		GFF6957	0.86	-1.3
33,028	-		GFF6957	0.86	+2.4
33,028	-		GFF6957	0.86	-0.0
33,028	-		GFF6957	0.86	-0.6
33,132	+				+0.2
33,132	+				+2.1
33,141	+				-0.3
33,347	+		GFF6958	0.45	-0.4
33,347	+		GFF6958	0.45	-0.3
33,347	+		GFF6958	0.45	+0.5
33,347	+		GFF6958	0.45	+0.5
33,348	-		GFF6958	0.46	-0.8
33,348	-		GFF6958	0.46	-0.5
33,348	-		GFF6958	0.46	-0.2
33,619	+		GFF6959	0.46	+2.2
33,620	-		GFF6959	0.46	-0.7
34,017	-		GFF6960	0.15	-1.4
34,017	-		GFF6960	0.15	-1.7
34,059	-		GFF6960	0.18	-1.0