Strain Fitness in Variovorax sp. SCN45 around GFF6701

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
9,398	+		GFF6700	0.66	-0.6
9,398	+		GFF6700	0.66	-0.7
9,398	+		GFF6700	0.66	-1.6
9,398	+		GFF6700	0.66	+0.0
9,399	-		GFF6700	0.66	+1.1
9,399	-		GFF6700	0.66	-0.2
9,674	+		GFF6700	0.82	+1.3
9,674	+		GFF6700	0.82	+0.2
9,675	-		GFF6700	0.82	-0.4
9,750	-		GFF6700	0.86	-0.8
9,985	-				-0.1
10,066	+				+1.6
10,066	+				-0.5
10,067	-				+1.2
10,067	-				-1.0
10,123	+		GFF6701	0.15	+0.6
10,351	+		GFF6701	0.38	-1.4
10,352	-		GFF6701	0.38	-0.7
10,352	-		GFF6701	0.38	-1.1
10,955	+				+3.9
10,956	-				+0.2
11,004	+				-1.2
11,004	+				-0.3