Strain Fitness in Variovorax sp. SCN45 around GFF6018

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
77,358	+		GFF6017	0.10	+1.8
77,359	-		GFF6017	0.10	-0.6
77,359	-		GFF6017	0.10	-0.3
77,367	+		GFF6017	0.11	+0.1
77,367	+		GFF6017	0.11	+0.6
77,368	-		GFF6017	0.11	-0.4
77,368	-		GFF6017	0.11	-2.4
77,469	+		GFF6017	0.23	-1.6
77,469	+		GFF6017	0.23	-0.3
77,469	+		GFF6017	0.23	-0.1
77,470	-		GFF6017	0.23	-2.7
77,470	-		GFF6017	0.23	-0.4
77,470	-		GFF6017	0.23	+0.7
77,508	+		GFF6017	0.27	+1.0
77,640	+		GFF6017	0.43	-0.6
77,851	-		GFF6017	0.67	-1.0
78,063	+				-0.5
78,076	-				-0.9
78,416	+		GFF6018	0.31	-0.8
78,417	-		GFF6018	0.31	+0.9
78,417	-		GFF6018	0.31	+0.2
79,044	+				+0.6
79,044	+				-2.2
79,149	+		GFF6019	0.13	-0.0
79,149	+		GFF6019	0.13	-0.4
79,150	-		GFF6019	0.13	-0.4
79,242	+		GFF6019	0.24	-0.5
79,242	+		GFF6019	0.24	-1.5
79,242	+		GFF6019	0.24	-0.0
79,242	+		GFF6019	0.24	-0.9
79,242	+		GFF6019	0.24	+0.4
79,243	-		GFF6019	0.24	-0.1
79,243	-		GFF6019	0.24	+0.1
79,243	-		GFF6019	0.24	-2.0
79,243	-		GFF6019	0.24	+0.7
79,243	-		GFF6019	0.24	-0.1
79,318	-		GFF6019	0.33	-0.4
79,318	-		GFF6019	0.33	-0.5
79,318	-		GFF6019	0.33	-0.3
79,324	-		GFF6019	0.33	-0.4
79,660	-		GFF6019	0.73	-0.0
79,943	+				-0.7
79,996	+		GFF6020	0.14	-0.0