Strain Fitness in Variovorax sp. SCN45 around GFF5814

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
192,637	+		GFF5813	0.72	+0.1
192,637	+		GFF5813	0.72	+0.1
192,638	-		GFF5813	0.72	-0.5
192,977	+				+0.1
192,977	+				+0.2
193,712	+		GFF5814	0.61	-1.2
193,943	+		GFF5814	0.85	-0.5
193,943	+		GFF5814	0.85	-0.0
193,944	-		GFF5814	0.85	+1.3
193,944	-		GFF5814	0.85	-0.9
194,129	-				-0.6
194,129	-				+0.6
194,286	+				-0.7
194,287	-				-1.5
194,287	-				-0.1
194,287	-				+0.4
194,287	-				-0.6
194,287	-				+0.4
194,379	+		GFF5815	0.16	+1.2
194,859	+		GFF5815	0.55	+0.3
194,860	-		GFF5815	0.55	-0.3