Strain Fitness in Variovorax sp. SCN45 around GFF4951

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
46,574	+		GFF4950	0.16	+0.2
47,054	+		GFF4950	0.63	-1.7
47,084	+		GFF4950	0.66	+0.1
47,084	+		GFF4950	0.66	+4.3
47,166	-		GFF4950	0.74	-1.1
47,166	-		GFF4950	0.74	-0.3
47,166	-		GFF4950	0.74	+0.0
47,836	+		GFF4951	0.40	-1.1
47,837	-		GFF4951	0.40	-0.7
47,848	+		GFF4951	0.41	-0.3
47,848	+		GFF4951	0.41	-0.5
47,849	-		GFF4951	0.41	-0.5
47,849	-		GFF4951	0.41	-0.6
47,849	-		GFF4951	0.41	+0.0
47,978	-		GFF4951	0.54	-0.6
47,978	-		GFF4951	0.54	+0.0
48,091	+		GFF4951	0.65	-0.4
48,314	+		GFF4951	0.88	-0.2
48,314	+		GFF4951	0.88	+1.7
48,478	+				-0.3
48,478	-				-0.3
48,479	-				+0.7
48,479	-				-0.3
48,479	-				-2.4
48,653	+		GFF4952	0.20	-0.1
48,653	+		GFF4952	0.20	-0.4
48,653	+		GFF4952	0.20	-0.9
48,654	-		GFF4952	0.20	+0.2
48,654	-		GFF4952	0.20	+0.4
48,654	-		GFF4952	0.20	+1.3
48,654	-		GFF4952	0.20	+2.7
48,734	+		GFF4952	0.30	-1.1
49,206	-		GFF4952	0.85	-0.6
49,307	+				-0.3
49,307	+				-0.2
49,307	+				-0.4
49,307	+				+0.7
49,307	+				+0.1
49,308	-				+0.1
49,331	+				-0.3
49,332	-				-0.3
49,375	-				+0.5
49,375	-				+0.1