Strain Fitness in Variovorax sp. SCN45 around GFF1487

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
79,726	+		GFF1486	0.54	+0.1
79,726	+		GFF1486	0.54	-0.2
79,726	+		GFF1486	0.54	-0.5
79,727	-		GFF1486	0.54	-0.3
80,013	+		GFF1486	0.68	-1.7
80,013	+		GFF1486	0.68	-0.9
80,013	+		GFF1486	0.68	+0.1
80,215	+		GFF1486	0.78	+0.6
80,215	+		GFF1486	0.78	-0.2
80,216	-		GFF1486	0.78	+0.5
80,216	-		GFF1486	0.78	-0.6
80,287	-		GFF1486	0.81	+0.6
80,696	+		GFF1487	0.13	-0.3
80,696	+		GFF1487	0.13	+0.1
80,696	+		GFF1487	0.13	-1.2
80,696	+		GFF1487	0.13	-0.8
80,696	+		GFF1487	0.13	-1.2
80,696	+		GFF1487	0.13	-1.3
80,697	-		GFF1487	0.14	-1.5
80,697	-		GFF1487	0.14	-1.3
80,822	+		GFF1487	0.74	-0.3
80,822	+		GFF1487	0.74	-0.7
81,510	-		GFF1488	0.60	+0.2
81,561	-		GFF1488	0.65	+0.2
81,561	-		GFF1488	0.65	-0.3
81,834	+				+1.0
81,835	-				+0.4
81,835	-				-0.6