Strain Fitness in Variovorax sp. SCN45 around GFF1477

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
67,807	+				-1.3
67,807	+				+0.5
67,808	-				-0.7
67,808	-				+0.9
67,849	+				-0.3
67,849	+				+0.7
67,850	-				+0.7
67,953	-		GFF1476	0.16	+1.5
67,953	-		GFF1476	0.16	+0.3
68,068	+		GFF1476	0.31	-1.1
68,069	-		GFF1476	0.31	-0.4
68,069	-		GFF1476	0.31	-1.8
68,069	-		GFF1476	0.31	+0.7
68,069	-		GFF1476	0.31	+0.7
68,072	+		GFF1476	0.31	+0.4
68,072	+		GFF1476	0.31	+0.4
68,073	-		GFF1476	0.32	-1.5
68,252	+		GFF1476	0.56	-0.1
68,252	+		GFF1476	0.56	-0.6
68,253	-		GFF1476	0.56	-0.0
68,273	+		GFF1476	0.58	-1.3
68,274	-		GFF1476	0.59	-0.3
68,310	-		GFF1476	0.63	-0.4
68,318	+		GFF1476	0.64	+0.8
68,318	+		GFF1476	0.64	+1.0
68,330	+		GFF1476	0.66	-0.7
68,571	+				-0.7
68,571	+				+0.7
68,572	-				-0.2
69,128	+		GFF1477	0.56	+3.0
69,129	-		GFF1477	0.56	-1.9
69,129	-		GFF1477	0.56	+0.6
69,129	-		GFF1477	0.56	-0.7
69,197	+		GFF1477	0.63	-0.2
69,237	-		GFF1477	0.67	+0.7
69,677	+				-0.8
69,678	-				+0.1
69,836	+		GFF1478	0.26	+1.2
70,238	+		GFF1478	0.72	-0.0