Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1118 and GFF1117 overlap by 2 nucleotides GFF1117 and GFF1119 are separated by 2 nucleotides GFF1119 and GFF1120 are separated by 65 nucleotides GFF1120 and GFF1121 are separated by 22 nucleotides
GFF1118 - Hydroxyacylglutathione hydrolase (EC 3.1.2.6), at 434,587 to 435,366
GFF1118
GFF1117 - FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-), at 435,365 to 436,135
GFF1117
GFF1119 - Ribonuclease HI (EC 3.1.26.4), at 436,138 to 436,620
GFF1119
GFF1120 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 436,686 to 437,141
GFF1120
GFF1121 - Molybdopterin molybdenumtransferase (EC 2.10.1.1), at 437,164 to 438,474
GFF1121
Position (kb) 436
437 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 435.220 kb on + strand, within GFF1118 at 435.220 kb on + strand, within GFF1118 at 435.220 kb on + strand, within GFF1118 at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.329 kb on + strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.330 kb on - strand at 435.379 kb on + strand at 435.380 kb on - strand at 435.381 kb on + strand at 435.381 kb on + strand at 435.419 kb on + strand at 435.419 kb on + strand at 435.419 kb on + strand at 435.420 kb on - strand at 435.420 kb on - strand at 435.420 kb on - strand at 435.420 kb on - strand at 435.476 kb on + strand, within GFF1117 at 435.476 kb on + strand, within GFF1117 at 435.477 kb on - strand, within GFF1117 at 435.639 kb on + strand, within GFF1117 at 435.639 kb on + strand, within GFF1117 at 435.640 kb on - strand, within GFF1117 at 435.640 kb on - strand, within GFF1117 at 435.640 kb on - strand, within GFF1117 at 435.785 kb on + strand, within GFF1117 at 435.785 kb on + strand, within GFF1117 at 435.786 kb on - strand, within GFF1117 at 435.786 kb on - strand, within GFF1117 at 435.786 kb on - strand, within GFF1117 at 435.786 kb on - strand, within GFF1117 at 435.812 kb on + strand, within GFF1117 at 435.812 kb on + strand, within GFF1117 at 435.813 kb on - strand, within GFF1117 at 435.813 kb on - strand, within GFF1117 at 435.813 kb on - strand, within GFF1117 at 435.843 kb on - strand, within GFF1117 at 435.908 kb on + strand, within GFF1117 at 435.908 kb on + strand, within GFF1117 at 435.908 kb on + strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 435.909 kb on - strand, within GFF1117 at 436.001 kb on + strand, within GFF1117 at 436.002 kb on - strand, within GFF1117 at 436.189 kb on + strand, within GFF1119 at 436.189 kb on + strand, within GFF1119 at 436.189 kb on + strand, within GFF1119 at 436.189 kb on + strand, within GFF1119 at 436.190 kb on - strand, within GFF1119 at 436.190 kb on - strand, within GFF1119 at 436.190 kb on - strand, within GFF1119 at 436.191 kb on + strand, within GFF1119 at 436.369 kb on + strand, within GFF1119 at 436.370 kb on - strand, within GFF1119 at 436.370 kb on - strand, within GFF1119 at 436.370 kb on - strand, within GFF1119 at 436.370 kb on - strand, within GFF1119 at 436.384 kb on + strand, within GFF1119 at 436.385 kb on - strand, within GFF1119 at 436.385 kb on - strand, within GFF1119 at 436.412 kb on + strand, within GFF1119 at 436.719 kb on + strand at 436.719 kb on + strand at 436.719 kb on + strand at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.968 kb on + strand, within GFF1120 at 436.969 kb on - strand, within GFF1120 at 436.969 kb on - strand, within GFF1120 at 437.139 kb on + strand at 437.165 kb on + strand at 437.165 kb on + strand at 437.165 kb on + strand at 437.349 kb on - strand, within GFF1121
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 435,220 + GFF1118 0.81 -0.6 435,220 + GFF1118 0.81 -1.8 435,220 + GFF1118 0.81 -1.5 435,329 + +0.1 435,329 + -1.2 435,329 + -0.1 435,329 + -0.6 435,329 + -2.5 435,329 + +0.0 435,329 + -0.4 435,329 + +0.1 435,329 + -1.4 435,329 + +0.1 435,329 + -0.4 435,329 + +0.7 435,329 + +0.2 435,329 + -1.2 435,329 + -0.1 435,329 + +0.2 435,330 - -0.4 435,330 - +1.7 435,330 - -1.2 435,330 - -0.4 435,330 - +0.2 435,330 - -1.0 435,330 - -2.0 435,330 - -1.3 435,330 - -0.1 435,330 - -1.1 435,330 - -0.3 435,330 - -0.3 435,330 - +0.4 435,330 - +1.8 435,330 - -0.4 435,330 - -0.8 435,330 - -1.6 435,330 - -1.5 435,379 + +0.8 435,380 - -1.1 435,381 + +0.0 435,381 + -1.0 435,419 + +0.5 435,419 + -0.4 435,419 + -1.3 435,420 - +0.7 435,420 - -0.6 435,420 - -0.9 435,420 - -1.4 435,476 + GFF1117 0.14 -0.3 435,476 + GFF1117 0.14 -2.0 435,477 - GFF1117 0.15 -0.2 435,639 + GFF1117 0.36 +0.0 435,639 + GFF1117 0.36 +0.8 435,640 - GFF1117 0.36 -0.8 435,640 - GFF1117 0.36 +1.0 435,640 - GFF1117 0.36 -1.9 435,785 + GFF1117 0.54 +0.4 435,785 + GFF1117 0.54 +0.0 435,786 - GFF1117 0.55 -1.8 435,786 - GFF1117 0.55 -0.3 435,786 - GFF1117 0.55 -1.4 435,786 - GFF1117 0.55 -0.5 435,812 + GFF1117 0.58 -0.3 435,812 + GFF1117 0.58 -0.1 435,813 - GFF1117 0.58 -0.2 435,813 - GFF1117 0.58 -1.0 435,813 - GFF1117 0.58 +1.8 435,843 - GFF1117 0.62 +0.0 435,908 + GFF1117 0.70 +0.2 435,908 + GFF1117 0.70 -1.0 435,908 + GFF1117 0.70 -0.3 435,909 - GFF1117 0.71 +0.2 435,909 - GFF1117 0.71 -0.6 435,909 - GFF1117 0.71 -0.2 435,909 - GFF1117 0.71 -0.6 435,909 - GFF1117 0.71 +0.2 435,909 - GFF1117 0.71 +3.5 436,001 + GFF1117 0.82 -0.1 436,002 - GFF1117 0.83 +0.0 436,189 + GFF1119 0.11 -0.2 436,189 + GFF1119 0.11 -1.0 436,189 + GFF1119 0.11 -1.8 436,189 + GFF1119 0.11 +0.2 436,190 - GFF1119 0.11 -0.8 436,190 - GFF1119 0.11 -1.1 436,190 - GFF1119 0.11 +0.2 436,191 + GFF1119 0.11 -1.1 436,369 + GFF1119 0.48 -1.3 436,370 - GFF1119 0.48 -1.0 436,370 - GFF1119 0.48 -1.2 436,370 - GFF1119 0.48 +1.9 436,370 - GFF1119 0.48 -0.8 436,384 + GFF1119 0.51 +0.0 436,385 - GFF1119 0.51 -1.2 436,385 - GFF1119 0.51 -1.2 436,412 + GFF1119 0.57 -0.4 436,719 + +0.4 436,719 + +0.4 436,719 + -0.4 436,968 + GFF1120 0.62 +0.5 436,968 + GFF1120 0.62 +0.6 436,968 + GFF1120 0.62 +1.1 436,968 + GFF1120 0.62 -0.6 436,968 + GFF1120 0.62 +0.5 436,968 + GFF1120 0.62 -2.2 436,968 + GFF1120 0.62 -0.6 436,969 - GFF1120 0.62 +0.9 436,969 - GFF1120 0.62 -0.2 437,139 + +0.1 437,165 + -0.2 437,165 + -0.9 437,165 + -0.8 437,349 - GFF1121 0.14 -0.8
Or see this region's nucleotide sequence