Experiment: M9 with Supernatant from Cyptococcus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2729 and GFF2730 overlap by 1 nucleotides
GFF2729 - hypothetical protein, at 163,780 to 163,971
GFF2729
GFF2730 - DNA topoisomerase IV subunit A (EC 5.99.1.3), at 163,971 to 166,376
GFF2730
Position (kb) 163
164 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 162.792 kb on + strand at 162.792 kb on + strand at 162.792 kb on + strand at 162.793 kb on - strand at 162.793 kb on - strand at 162.793 kb on - strand at 162.862 kb on - strand at 162.862 kb on - strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.870 kb on + strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.871 kb on - strand at 162.918 kb on + strand at 162.918 kb on + strand at 162.918 kb on + strand at 162.918 kb on + strand at 162.919 kb on - strand at 162.919 kb on - strand at 162.933 kb on + strand at 162.933 kb on + strand at 162.951 kb on + strand at 162.952 kb on - strand at 162.952 kb on - strand at 163.132 kb on + strand at 163.133 kb on - strand at 163.204 kb on + strand at 163.205 kb on - strand at 163.254 kb on + strand at 163.254 kb on + strand at 163.255 kb on - strand at 163.286 kb on + strand at 163.286 kb on + strand at 163.374 kb on + strand at 163.374 kb on + strand at 163.374 kb on + strand at 163.374 kb on + strand at 163.374 kb on + strand at 163.375 kb on - strand at 163.375 kb on - strand at 163.375 kb on - strand at 163.560 kb on + strand at 163.560 kb on + strand at 163.561 kb on - strand at 163.579 kb on + strand at 163.580 kb on - strand at 163.580 kb on - strand at 163.580 kb on - strand at 163.593 kb on + strand at 163.593 kb on + strand at 163.593 kb on + strand at 163.625 kb on + strand at 163.626 kb on - strand at 163.652 kb on + strand at 163.721 kb on + strand at 163.721 kb on + strand at 163.721 kb on + strand at 163.721 kb on + strand at 163.722 kb on - strand at 163.722 kb on - strand at 163.754 kb on + strand at 163.754 kb on + strand at 163.755 kb on - strand at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.907 kb on + strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 163.908 kb on - strand, within GFF2729 at 164.350 kb on - strand, within GFF2730 at 164.411 kb on - strand, within GFF2730 at 164.411 kb on - strand, within GFF2730 at 164.660 kb on - strand, within GFF2730 at 164.660 kb on - strand, within GFF2730 at 164.660 kb on - strand, within GFF2730
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus remove 162,792 + +0.3 162,792 + +0.6 162,792 + -0.3 162,793 - -0.2 162,793 - +0.3 162,793 - +0.9 162,862 - -0.1 162,862 - -1.0 162,870 + -1.6 162,870 + +1.5 162,870 + -0.5 162,870 + +0.2 162,870 + +1.1 162,870 + +1.5 162,870 + +0.1 162,871 - -1.5 162,871 - -1.8 162,871 - -0.3 162,871 - +2.0 162,871 - -0.1 162,871 - -0.7 162,871 - -0.6 162,871 - -0.3 162,871 - +1.3 162,918 + +1.1 162,918 + +1.5 162,918 + -0.7 162,918 + +0.1 162,919 - +0.2 162,919 - -0.5 162,933 + -2.2 162,933 + -0.2 162,951 + -0.6 162,952 - -1.1 162,952 - +0.3 163,132 + -0.5 163,133 - -0.6 163,204 + -0.6 163,205 - -2.4 163,254 + -0.2 163,254 + -1.5 163,255 - -0.1 163,286 + -1.3 163,286 + +0.8 163,374 + -1.0 163,374 + +2.9 163,374 + +0.1 163,374 + +0.1 163,374 + +1.5 163,375 - -1.0 163,375 - +3.5 163,375 - -0.2 163,560 + -0.4 163,560 + -0.9 163,561 - -0.5 163,579 + +1.0 163,580 - -0.3 163,580 - -2.3 163,580 - +0.3 163,593 + +0.7 163,593 + -0.3 163,593 + +0.5 163,625 + +0.3 163,626 - -0.2 163,652 + -0.5 163,721 + +1.2 163,721 + -0.8 163,721 + -0.7 163,721 + -0.3 163,722 - -0.4 163,722 - +0.2 163,754 + -0.7 163,754 + -0.8 163,755 - -0.1 163,907 + GFF2729 0.66 -0.8 163,907 + GFF2729 0.66 +0.6 163,907 + GFF2729 0.66 +1.5 163,907 + GFF2729 0.66 -2.2 163,907 + GFF2729 0.66 -0.5 163,907 + GFF2729 0.66 +0.3 163,907 + GFF2729 0.66 -2.5 163,907 + GFF2729 0.66 +0.7 163,907 + GFF2729 0.66 +0.6 163,907 + GFF2729 0.66 -0.1 163,907 + GFF2729 0.66 -1.3 163,907 + GFF2729 0.66 -0.6 163,907 + GFF2729 0.66 -0.1 163,907 + GFF2729 0.66 +1.1 163,907 + GFF2729 0.66 +0.5 163,907 + GFF2729 0.66 -0.5 163,908 - GFF2729 0.67 +0.0 163,908 - GFF2729 0.67 +0.3 163,908 - GFF2729 0.67 -0.0 163,908 - GFF2729 0.67 +0.5 163,908 - GFF2729 0.67 -0.3 163,908 - GFF2729 0.67 -0.2 163,908 - GFF2729 0.67 +0.8 163,908 - GFF2729 0.67 -0.4 163,908 - GFF2729 0.67 -0.1 163,908 - GFF2729 0.67 -0.1 163,908 - GFF2729 0.67 -0.5 163,908 - GFF2729 0.67 +0.4 163,908 - GFF2729 0.67 -0.1 163,908 - GFF2729 0.67 -0.1 163,908 - GFF2729 0.67 +0.6 163,908 - GFF2729 0.67 +2.1 163,908 - GFF2729 0.67 +0.5 163,908 - GFF2729 0.67 +1.6 163,908 - GFF2729 0.67 -0.3 163,908 - GFF2729 0.67 -0.1 164,350 - GFF2730 0.16 -0.3 164,411 - GFF2730 0.18 -1.1 164,411 - GFF2730 0.18 -1.7 164,660 - GFF2730 0.29 +0.2 164,660 - GFF2730 0.29 -2.1 164,660 - GFF2730 0.29 -0.5
Or see this region's nucleotide sequence