Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03707

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,145,217	+		MPMX19_03705	0.77	-2.4
1,145,232	+		MPMX19_03705	0.79	-0.7
1,145,232	+		MPMX19_03705	0.79	-2.7
1,145,232	+		MPMX19_03705	0.79	-1.6
1,145,233	-		MPMX19_03705	0.79	-0.1
1,145,233	-		MPMX19_03705	0.79	+0.7
1,145,280	+		MPMX19_03705	0.86	+1.1
1,145,280	+		MPMX19_03705	0.86	-0.4
1,145,280	+		MPMX19_03705	0.86	-1.1
1,145,280	+		MPMX19_03705	0.86	+0.4
1,145,281	-		MPMX19_03705	0.86	+0.6
1,145,281	-		MPMX19_03705	0.86	-0.5
1,145,281	-		MPMX19_03705	0.86	+0.3
1,145,281	-		MPMX19_03705	0.86	-0.8
1,145,281	-		MPMX19_03705	0.86	-1.1
1,145,281	-		MPMX19_03705	0.86	-0.8
1,145,281	-		MPMX19_03705	0.86	+0.1
1,145,281	-		MPMX19_03705	0.86	-0.4
1,145,301	+		MPMX19_03705	0.89	-0.1
1,145,301	+		MPMX19_03705	0.89	-1.6
1,145,301	+		MPMX19_03705	0.89	-1.6
1,145,301	+		MPMX19_03705	0.89	+0.8
1,145,301	+		MPMX19_03705	0.89	+0.4
1,145,301	+		MPMX19_03705	0.89	-2.9
1,145,302	-		MPMX19_03705	0.89	-1.2
1,145,302	-		MPMX19_03705	0.89	-0.1
1,145,391	+				-0.2
1,145,391	+				+0.1
1,145,391	+				+0.0
1,145,391	+				-0.3
1,145,392	-				+0.7
1,145,392	-				-0.8
1,145,392	-				+1.8
1,145,392	-				+1.5
1,145,392	-				+0.6
1,145,392	-				-1.3
1,145,392	-				+0.3
1,145,392	-				-1.5
1,145,392	-				-0.1
1,145,562	+		MPMX19_03706	0.27	-0.4
1,145,562	+		MPMX19_03706	0.27	-0.8
1,145,562	+		MPMX19_03706	0.27	+0.1
1,145,562	+		MPMX19_03706	0.27	+0.3
1,145,563	-		MPMX19_03706	0.27	-0.1
1,145,563	-		MPMX19_03706	0.27	-2.2
1,145,563	-		MPMX19_03706	0.27	-0.9
1,145,613	+		MPMX19_03706	0.34	+0.3
1,145,613	+		MPMX19_03706	0.34	-0.4
1,145,613	+		MPMX19_03706	0.34	-0.1
1,145,613	+		MPMX19_03706	0.34	-0.1
1,145,613	+		MPMX19_03706	0.34	-1.3
1,145,613	+		MPMX19_03706	0.34	-1.1
1,145,613	+		MPMX19_03706	0.34	+0.8
1,145,613	+		MPMX19_03706	0.34	-0.1
1,145,613	+		MPMX19_03706	0.34	-0.4
1,145,614	-		MPMX19_03706	0.34	+0.2
1,145,614	-		MPMX19_03706	0.34	-0.8
1,145,614	-		MPMX19_03706	0.34	-1.3
1,145,614	-		MPMX19_03706	0.34	-0.9
1,145,614	-		MPMX19_03706	0.34	-0.8
1,145,614	-		MPMX19_03706	0.34	+0.5
1,145,614	-		MPMX19_03706	0.34	+0.5
1,145,614	-		MPMX19_03706	0.34	-1.8
1,145,614	-		MPMX19_03706	0.34	-1.1
1,145,614	-		MPMX19_03706	0.34	-0.9
1,145,614	-		MPMX19_03706	0.34	+0.2
1,145,614	-		MPMX19_03706	0.34	-0.4
1,145,614	-		MPMX19_03706	0.34	-0.4
1,145,614	-		MPMX19_03706	0.34	+0.7
1,145,614	-		MPMX19_03706	0.34	+0.3
1,145,614	-		MPMX19_03706	0.34	-0.1
1,145,616	+		MPMX19_03706	0.35	-0.5
1,145,616	+		MPMX19_03706	0.35	+1.1
1,145,616	+		MPMX19_03706	0.35	-0.8
1,145,616	+		MPMX19_03706	0.35	-1.5
1,145,616	+		MPMX19_03706	0.35	-0.3
1,145,616	+		MPMX19_03706	0.35	+0.2
1,145,616	+		MPMX19_03706	0.35	-0.2
1,145,616	+		MPMX19_03706	0.35	-0.4
1,145,616	+		MPMX19_03706	0.35	-0.4
1,145,616	+		MPMX19_03706	0.35	+0.5
1,145,616	+		MPMX19_03706	0.35	-0.9
1,145,617	-		MPMX19_03706	0.35	-0.4
1,145,617	-		MPMX19_03706	0.35	-3.2
1,145,617	-		MPMX19_03706	0.35	-1.8
1,145,617	-		MPMX19_03706	0.35	-1.4
1,145,617	-		MPMX19_03706	0.35	+0.4
1,145,697	+		MPMX19_03706	0.47	-1.9
1,145,698	-		MPMX19_03706	0.47	-1.0
1,145,698	-		MPMX19_03706	0.47	-0.4
1,145,698	-		MPMX19_03706	0.47	+0.3
1,145,910	+		MPMX19_03706	0.79	+0.4
1,145,910	+		MPMX19_03706	0.79	-0.3
1,145,910	+		MPMX19_03706	0.79	-1.1
1,145,910	+		MPMX19_03706	0.79	-0.7
1,145,910	+		MPMX19_03706	0.79	-0.4
1,145,910	+		MPMX19_03706	0.79	+0.0
1,145,910	+		MPMX19_03706	0.79	-0.5
1,145,910	+		MPMX19_03706	0.79	-0.1
1,145,910	+		MPMX19_03706	0.79	-0.8
1,145,911	-		MPMX19_03706	0.79	-1.3
1,145,911	-		MPMX19_03706	0.79	-0.5
1,145,911	-		MPMX19_03706	0.79	+0.5
1,145,911	-		MPMX19_03706	0.79	-1.9
1,145,911	-		MPMX19_03706	0.79	-0.3
1,145,911	-		MPMX19_03706	0.79	-1.1
1,145,911	-		MPMX19_03706	0.79	-0.5
1,145,911	-		MPMX19_03706	0.79	-0.8
1,145,911	-		MPMX19_03706	0.79	-1.9
1,145,937	+		MPMX19_03706	0.83	-0.8
1,145,937	+		MPMX19_03706	0.83	-2.3
1,145,937	+		MPMX19_03706	0.83	+0.2
1,145,937	+		MPMX19_03706	0.83	-0.0
1,145,937	+		MPMX19_03706	0.83	-0.7
1,145,937	+		MPMX19_03706	0.83	-1.0
1,145,938	-		MPMX19_03706	0.83	+0.1
1,145,938	-		MPMX19_03706	0.83	-0.6
1,145,938	-		MPMX19_03706	0.83	+0.4
1,145,938	-		MPMX19_03706	0.83	-0.7
1,145,938	-		MPMX19_03706	0.83	-1.8
1,145,938	-		MPMX19_03706	0.83	+0.2
1,145,940	+		MPMX19_03706	0.83	+0.4
1,145,940	+		MPMX19_03706	0.83	+1.2
1,145,941	-		MPMX19_03706	0.83	+0.9
1,145,941	-		MPMX19_03706	0.83	-0.4
1,145,979	+		MPMX19_03706	0.89	-0.1
1,145,980	-		MPMX19_03706	0.89	-0.4
1,145,994	+				-1.6
1,145,994	+				-1.2
1,145,994	+				-0.8
1,145,994	+				-0.8
1,145,995	-				-0.3
1,146,090	+				-1.5
1,146,091	-				-0.2
1,146,368	+		MPMX19_03707	0.35	-1.7
1,146,369	-		MPMX19_03707	0.35	-1.1
1,146,567	-		MPMX19_03707	0.59	+1.0
1,146,756	+		MPMX19_03707	0.82	-0.1
1,146,756	+		MPMX19_03707	0.82	-0.5
1,146,757	-		MPMX19_03707	0.82	-2.9
1,146,757	-		MPMX19_03707	0.82	-1.3
1,146,768	-		MPMX19_03707	0.83	-0.9
1,146,914	+				-2.7
1,146,914	+				+0.7
1,146,915	-				-0.8
1,146,955	+				-0.5
1,146,955	+				-0.2
1,146,955	+				-0.1
1,146,955	+				-1.5
1,146,956	-				+0.4
1,146,956	-				-0.4
1,146,956	-				-0.3
1,146,956	-				-0.8
1,146,959	+				-0.2
1,146,959	+				+0.3
1,146,959	+				-1.8
1,146,959	+				+1.8
1,146,959	+				-0.7
1,146,959	+				-1.2
1,146,959	+				-1.2
1,146,959	+				-0.4
1,146,959	+				-0.1
1,146,959	+				-0.1
1,146,959	+				-0.8
1,146,959	+				-0.1
1,146,959	+				-0.7
1,146,959	+				-0.7
1,146,959	+				-0.5
1,146,959	+				-0.2
1,146,959	+				-0.8
1,146,959	+				-0.7
1,146,959	+				-0.3
1,146,959	+				-0.4
1,146,959	+				-0.1
1,146,959	+				+0.3
1,146,959	+				-1.8
1,146,959	+				-0.5
1,146,959	+				-2.4
1,146,959	+				-1.1
1,146,959	+				-1.6
1,146,959	+				-0.6
1,146,959	+				+2.5
1,146,959	+				+0.2
1,146,959	+				-0.7
1,146,959	+				-0.9
1,146,959	+				+0.1
1,146,960	-				-0.3
1,146,960	-				+1.5
1,146,960	-				-0.8
1,146,960	-				-0.2
1,146,960	-				-1.2
1,146,960	-				-1.4
1,146,960	-				-0.5
1,146,960	-				-0.6
1,146,960	-				-0.2
1,146,960	-				-0.2
1,146,960	-				-0.5
1,146,960	-				+0.2
1,146,960	-				+0.3
1,146,960	-				+0.2
1,146,960	-				-0.1
1,146,960	-				-1.5
1,146,960	-				-0.5
1,146,960	-				+0.2
1,146,960	-				-0.4
1,146,960	-				-0.7
1,146,960	-				-1.5
1,146,960	-				-3.1
1,146,960	-				-0.1
1,146,960	-				-1.6
1,146,960	-				-1.1
1,146,960	-				+2.1
1,146,960	-				-1.6
1,146,960	-				-1.1
1,146,960	-				-0.6
1,146,960	-				-0.9
1,146,960	-				-3.1
1,146,960	-				+0.5
1,146,960	-				-0.1
1,146,960	-				+1.9
1,146,960	-				-0.1
1,146,960	-				+0.7
1,146,960	-				+0.8
1,146,960	-				-1.1
1,147,005	+				-0.1
1,147,005	+				-0.9
1,147,005	+				-0.4
1,147,005	+				+0.9
1,147,005	+				-1.9
1,147,005	+				+0.5
1,147,005	+				+0.5
1,147,006	-				-0.2
1,147,006	-				-0.3
1,147,006	-				-1.4
1,147,006	-				+0.2
1,147,006	-				+0.9
1,147,006	-				-1.1
1,147,006	-				+0.8
1,147,006	-				+0.8
1,147,006	-				+0.2
1,147,041	+				-0.5
1,147,041	+				-0.4
1,147,041	+				-0.9
1,147,041	+				-2.5
1,147,041	+				+0.8
1,147,041	+				-1.8
1,147,041	+				-0.5
1,147,041	+				+0.0
1,147,041	+				-0.9
1,147,042	-				-0.1
1,147,042	-				+0.9
1,147,042	-				-0.6
1,147,042	-				+0.3
1,147,042	-				+0.3
1,147,042	-				+1.5
1,147,042	-				-0.2
1,147,042	-				-1.8
1,147,042	-				-0.8
1,147,172	+		MPMX19_03708	0.23	+1.2
1,147,172	+		MPMX19_03708	0.23	-1.1
1,147,172	+		MPMX19_03708	0.23	-0.3
1,147,173	-		MPMX19_03708	0.23	-1.2
1,147,185	+		MPMX19_03708	0.24	-0.4
1,147,185	+		MPMX19_03708	0.24	-0.6
1,147,185	+		MPMX19_03708	0.24	-1.3
1,147,185	+		MPMX19_03708	0.24	+0.8
1,147,185	+		MPMX19_03708	0.24	-0.9
1,147,186	-		MPMX19_03708	0.24	+0.4
1,147,386	+		MPMX19_03708	0.46	-2.8
1,147,386	+		MPMX19_03708	0.46	+1.2
1,147,387	-		MPMX19_03708	0.46	-0.5
1,147,387	-		MPMX19_03708	0.46	+0.7
1,147,387	-		MPMX19_03708	0.46	+0.5
1,147,387	-		MPMX19_03708	0.46	-1.0
1,147,387	-		MPMX19_03708	0.46	+0.5
1,147,387	-		MPMX19_03708	0.46	-1.0
1,147,387	-		MPMX19_03708	0.46	-0.5
1,147,387	-		MPMX19_03708	0.46	-0.4
1,147,687	-		MPMX19_03708	0.78	-2.2
1,147,740	+		MPMX19_03708	0.84	-1.0
1,147,740	+		MPMX19_03708	0.84	-1.5
1,147,740	+		MPMX19_03708	0.84	-0.7
1,147,740	+		MPMX19_03708	0.84	+0.3
1,147,740	+		MPMX19_03708	0.84	-1.1
1,147,740	+		MPMX19_03708	0.84	-2.6
1,147,740	+		MPMX19_03708	0.84	-0.9
1,147,740	+		MPMX19_03708	0.84	+1.9
1,147,740	+		MPMX19_03708	0.84	-0.4
1,147,740	+		MPMX19_03708	0.84	-0.2
1,147,740	+		MPMX19_03708	0.84	-0.1
1,147,740	+		MPMX19_03708	0.84	+0.1
1,147,741	-		MPMX19_03708	0.84	+0.9
1,147,741	-		MPMX19_03708	0.84	+0.2
1,147,741	-		MPMX19_03708	0.84	-1.1
1,147,741	-		MPMX19_03708	0.84	-1.4
1,147,741	-		MPMX19_03708	0.84	-0.4
1,147,741	-		MPMX19_03708	0.84	-1.6
1,147,741	-		MPMX19_03708	0.84	-0.9
1,147,741	-		MPMX19_03708	0.84	+0.9
1,147,741	-		MPMX19_03708	0.84	-1.1
1,147,741	-		MPMX19_03708	0.84	+0.8
1,147,741	-		MPMX19_03708	0.84	-1.3
1,147,741	-		MPMX19_03708	0.84	-1.9
1,147,741	-		MPMX19_03708	0.84	-0.8
1,147,741	-		MPMX19_03708	0.84	-1.6
1,147,741	-		MPMX19_03708	0.84	-0.8
1,147,741	-		MPMX19_03708	0.84	-0.7
1,147,741	-		MPMX19_03708	0.84	-0.5
1,147,863	+				-1.6
1,147,863	+				+0.0
1,147,863	+				+0.2
1,147,863	+				-0.1
1,147,863	+				-0.8
1,147,863	+				+0.7
1,147,864	-				-0.5
1,147,864	-				-0.6
1,147,864	-				-1.1
1,147,864	-				-2.5