Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02422

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,541,519	+		MPMX19_02421	0.74	-0.9
2,541,519	+		MPMX19_02421	0.74	+0.1
2,541,519	+		MPMX19_02421	0.74	+0.1
2,541,519	+		MPMX19_02421	0.74	+0.1
2,541,519	+		MPMX19_02421	0.74	-1.3
2,541,519	+		MPMX19_02421	0.74	+1.2
2,541,519	+		MPMX19_02421	0.74	-0.8
2,541,519	+		MPMX19_02421	0.74	-1.1
2,541,519	+		MPMX19_02421	0.74	+0.1
2,541,519	+		MPMX19_02421	0.74	+2.0
2,541,519	+		MPMX19_02421	0.74	+0.5
2,541,519	+		MPMX19_02421	0.74	-0.4
2,541,519	+		MPMX19_02421	0.74	+0.4
2,541,519	+		MPMX19_02421	0.74	-1.0
2,541,519	+		MPMX19_02421	0.74	+0.7
2,541,520	-		MPMX19_02421	0.74	-0.6
2,541,520	-		MPMX19_02421	0.74	-1.4
2,541,520	-		MPMX19_02421	0.74	-0.9
2,541,520	-		MPMX19_02421	0.74	+1.0
2,541,520	-		MPMX19_02421	0.74	-0.3
2,541,520	-		MPMX19_02421	0.74	-1.0
2,541,520	-		MPMX19_02421	0.74	-1.5
2,541,520	-		MPMX19_02421	0.74	-1.8
2,541,520	-		MPMX19_02421	0.74	+1.0
2,541,520	-		MPMX19_02421	0.74	-1.9
2,541,520	-		MPMX19_02421	0.74	+1.1
2,541,520	-		MPMX19_02421	0.74	-2.0
2,541,520	-		MPMX19_02421	0.74	-0.5
2,541,520	-		MPMX19_02421	0.74	-1.3
2,541,520	-		MPMX19_02421	0.74	-0.1
2,541,522	+		MPMX19_02421	0.74	+0.5
2,541,522	+		MPMX19_02421	0.74	+1.0
2,541,522	+		MPMX19_02421	0.74	+0.1
2,541,522	+		MPMX19_02421	0.74	+0.7
2,541,522	+		MPMX19_02421	0.74	+1.2
2,541,522	+		MPMX19_02421	0.74	-1.0
2,541,522	+		MPMX19_02421	0.74	-0.0
2,541,523	-		MPMX19_02421	0.74	+0.9
2,541,523	-		MPMX19_02421	0.74	-1.9
2,541,523	-		MPMX19_02421	0.74	-0.6
2,541,523	-		MPMX19_02421	0.74	-0.4
2,541,523	-		MPMX19_02421	0.74	-0.2
2,541,523	-		MPMX19_02421	0.74	-0.5
2,541,523	-		MPMX19_02421	0.74	-1.4
2,541,523	-		MPMX19_02421	0.74	-1.6
2,541,523	-		MPMX19_02421	0.74	-0.7
2,541,585	+		MPMX19_02421	0.78	+0.5
2,541,588	+		MPMX19_02421	0.78	+1.7
2,541,588	+		MPMX19_02421	0.78	-0.9
2,541,588	+		MPMX19_02421	0.78	-1.1
2,541,589	-		MPMX19_02421	0.78	-1.6
2,541,589	-		MPMX19_02421	0.78	-0.4
2,541,642	+		MPMX19_02421	0.81	-0.6
2,541,642	+		MPMX19_02421	0.81	-0.1
2,541,642	+		MPMX19_02421	0.81	+0.1
2,541,642	+		MPMX19_02421	0.81	+1.0
2,541,642	+		MPMX19_02421	0.81	-0.4
2,541,642	+		MPMX19_02421	0.81	+0.7
2,541,642	+		MPMX19_02421	0.81	-0.7
2,541,642	+		MPMX19_02421	0.81	+0.1
2,541,642	+		MPMX19_02421	0.81	-0.6
2,541,642	+		MPMX19_02421	0.81	+1.5
2,541,643	-		MPMX19_02421	0.81	+0.2
2,541,643	-		MPMX19_02421	0.81	-1.6
2,541,643	-		MPMX19_02421	0.81	+0.3
2,541,643	-		MPMX19_02421	0.81	-1.4
2,541,643	-		MPMX19_02421	0.81	-0.2
2,541,643	-		MPMX19_02421	0.81	-0.9
2,541,643	-		MPMX19_02421	0.81	-0.2
2,541,643	-		MPMX19_02421	0.81	+0.4
2,541,643	-		MPMX19_02421	0.81	-2.2
2,541,643	-		MPMX19_02421	0.81	-0.2
2,541,810	+				-0.7
2,541,810	+				-0.1
2,541,811	-				-1.1
2,541,811	-				+0.8
2,541,825	+				-1.5
2,541,825	+				+1.3
2,541,825	+				+0.4
2,541,825	+				+0.6
2,541,825	+				-1.7
2,541,825	+				-1.5
2,541,825	+				+0.1
2,541,825	+				-2.4
2,541,825	+				+0.7
2,541,825	+				-1.0
2,541,825	+				-0.7
2,541,825	+				-0.4
2,541,825	+				+1.0
2,541,825	+				+0.2
2,541,825	+				-1.7
2,541,825	+				-0.2
2,541,825	+				-0.1
2,541,825	+				-2.8
2,541,826	-				-1.4
2,541,826	-				+0.5
2,541,826	-				+0.4
2,541,826	-				-1.0
2,541,826	-				+0.5
2,541,826	-				-1.1
2,541,826	-				-0.7
2,541,826	-				-0.8
2,541,826	-				-1.3
2,541,826	-				-0.1
2,541,826	-				-2.0
2,541,826	-				-0.0
2,541,826	-				-1.2
2,541,826	-				+0.4
2,541,826	-				+1.0
2,541,826	-				+1.1
2,541,826	-				-1.3
2,541,826	-				-1.6
2,541,826	-				-1.6
2,541,930	-				-0.6
2,541,930	-				-0.5
2,541,979	+				-0.2
2,541,979	+				+0.4
2,541,979	+				+1.4
2,541,979	+				-1.5
2,541,979	+				+0.5
2,541,980	-				-0.9
2,541,980	-				-1.7
2,541,980	-				-0.6
2,541,980	-				-1.3
2,541,980	-				-1.2
2,541,980	-				+0.6
2,541,980	-				+0.7
2,541,980	-				-0.6
2,541,989	+				-0.6
2,541,990	-				+0.3
2,541,990	-				-1.6
2,541,990	-				-1.3
2,542,018	+				-1.8
2,542,018	+				+1.1
2,542,018	+				-1.5
2,542,018	+				-0.4
2,542,018	+				-0.6
2,542,019	-				-0.2
2,542,019	-				+0.8
2,542,019	-				-1.4
2,542,019	-				-0.9
2,542,059	-				-0.5
2,542,059	-				-1.1
2,542,059	-				-0.3
2,542,059	-				-1.7
2,542,083	+				-1.5
2,542,083	+				-1.6
2,542,083	+				+0.1
2,542,083	+				-0.7
2,542,083	+				-0.9
2,542,083	+				+0.1
2,542,083	+				-0.1
2,542,083	+				+0.4
2,542,083	+				-1.5
2,542,083	+				+1.4
2,542,084	-				-0.6
2,542,084	-				-1.1
2,542,084	-				-0.5
2,542,084	-				-1.2
2,542,084	-				-0.0
2,542,084	-				+1.0
2,542,084	-				-1.1
2,542,084	-				+0.1
2,542,084	-				-1.1
2,542,084	-				+0.1
2,542,085	+				+1.2
2,542,086	-				+0.2
2,542,113	+				-0.5
2,542,113	+				-2.6
2,542,114	-				-0.2
2,542,114	-				-1.4
2,542,114	-				+0.5
2,542,125	+				-1.0
2,542,125	+				-0.5
2,542,125	+				-0.4
2,542,126	-				-1.2
2,542,126	-				+0.0
2,542,126	-				+1.0
2,542,130	+				-1.1
2,542,131	-				+0.1
2,542,131	-				+0.3
2,542,131	-				+0.2
2,542,131	-				-0.4
2,542,134	-				-0.2
2,542,134	-				+1.0
2,542,169	+				-2.0
2,542,169	+				+0.3
2,542,169	+				-0.7
2,542,169	+				-1.9
2,542,170	-				-0.8
2,542,170	-				-0.6
2,542,170	-				-0.6
2,542,170	-				+0.1
2,542,170	-				-0.0
2,542,204	-				-0.3
2,542,204	-				+0.4
2,542,204	-				+0.1
2,542,225	+				-1.4
2,542,226	-				-1.0
2,542,226	-				-1.0
2,542,226	-				-0.1
2,542,328	+				-0.1
2,542,328	+				-0.9
2,542,328	+				-2.3
2,542,328	+				-1.0
2,542,328	+				-0.8
2,542,328	+				+0.6
2,542,328	+				-0.3
2,542,328	+				+0.3
2,542,328	+				-0.1
2,542,328	+				+0.7
2,542,328	+				-0.5
2,542,329	-				-0.4
2,542,329	-				-0.8
2,542,329	-				-0.9
2,542,329	-				+0.1
2,542,329	-				-2.2
2,542,329	-				+0.4
2,542,329	-				+0.1
2,542,329	-				-0.2
2,542,329	-				-0.0
2,542,329	-				-0.8
2,542,329	-				-1.9
2,542,329	-				-0.3
2,542,361	+				-0.2
2,542,361	+				-1.1
2,542,361	+				-0.9
2,542,362	-				-0.6
2,542,362	-				+0.7
2,542,362	-				-0.0
2,542,363	+				-0.5
2,542,422	+				+0.2
2,542,528	-				-0.7
2,542,528	-				-1.7
2,542,528	-				-0.2
2,542,603	+		MPMX19_02422	0.13	+0.2
2,542,603	+		MPMX19_02422	0.13	+0.1
2,542,603	+		MPMX19_02422	0.13	+0.5
2,542,603	+		MPMX19_02422	0.13	-0.3
2,542,603	+		MPMX19_02422	0.13	-0.0
2,542,603	+		MPMX19_02422	0.13	+0.1
2,542,603	+		MPMX19_02422	0.13	-0.8
2,542,603	+		MPMX19_02422	0.13	-0.8
2,542,603	+		MPMX19_02422	0.13	+0.6
2,542,603	+		MPMX19_02422	0.13	-0.4
2,542,603	+		MPMX19_02422	0.13	-0.0
2,542,603	+		MPMX19_02422	0.13	-0.6
2,542,603	+		MPMX19_02422	0.13	-1.8
2,542,603	+		MPMX19_02422	0.13	-1.2
2,542,603	+		MPMX19_02422	0.13	-2.1
2,542,603	+		MPMX19_02422	0.13	-1.9
2,542,603	+		MPMX19_02422	0.13	+0.8
2,542,603	+		MPMX19_02422	0.13	+1.2
2,542,603	+		MPMX19_02422	0.13	+0.5
2,542,603	+		MPMX19_02422	0.13	+0.6
2,542,604	-		MPMX19_02422	0.13	+0.1
2,542,604	-		MPMX19_02422	0.13	+0.3
2,542,604	-		MPMX19_02422	0.13	-0.6
2,542,604	-		MPMX19_02422	0.13	-0.6
2,542,604	-		MPMX19_02422	0.13	+0.4
2,542,604	-		MPMX19_02422	0.13	-1.1
2,542,604	-		MPMX19_02422	0.13	-1.9
2,542,604	-		MPMX19_02422	0.13	+0.4
2,542,604	-		MPMX19_02422	0.13	-0.1
2,542,604	-		MPMX19_02422	0.13	-1.0
2,542,604	-		MPMX19_02422	0.13	+0.0
2,542,604	-		MPMX19_02422	0.13	+0.3
2,542,604	-		MPMX19_02422	0.13	-0.4
2,542,604	-		MPMX19_02422	0.13	-0.7
2,542,604	-		MPMX19_02422	0.13	+0.5
2,542,604	-		MPMX19_02422	0.13	-0.4
2,542,604	-		MPMX19_02422	0.13	-0.2
2,542,604	-		MPMX19_02422	0.13	+0.1
2,542,604	-		MPMX19_02422	0.13	-1.9
2,542,604	-		MPMX19_02422	0.13	-0.3
2,542,633	+		MPMX19_02422	0.17	-1.0
2,542,633	+		MPMX19_02422	0.17	+0.2
2,542,634	-		MPMX19_02422	0.17	-1.0
2,542,634	-		MPMX19_02422	0.17	-0.1
2,542,813	+		MPMX19_02422	0.38	-0.8
2,542,813	+		MPMX19_02422	0.38	-0.5
2,542,813	+		MPMX19_02422	0.38	+0.1
2,542,814	-		MPMX19_02422	0.38	-0.6
2,542,814	-		MPMX19_02422	0.38	+0.2
2,542,927	+		MPMX19_02422	0.52	-0.8
2,542,927	+		MPMX19_02422	0.52	-1.1
2,542,927	+		MPMX19_02422	0.52	+0.4
2,542,927	+		MPMX19_02422	0.52	+0.3
2,542,928	-		MPMX19_02422	0.52	-0.8
2,542,928	-		MPMX19_02422	0.52	-0.5
2,542,928	-		MPMX19_02422	0.52	+0.9
2,542,928	-		MPMX19_02422	0.52	+1.0
2,542,928	-		MPMX19_02422	0.52	+1.2
2,542,928	-		MPMX19_02422	0.52	+0.8
2,542,928	-		MPMX19_02422	0.52	+1.3
2,542,928	-		MPMX19_02422	0.52	-0.1
2,543,239	+		MPMX19_02422	0.89	-0.5
2,543,239	+		MPMX19_02422	0.89	+0.5
2,543,239	+		MPMX19_02422	0.89	+0.4
2,543,240	-		MPMX19_02422	0.89	-0.2
2,543,240	-		MPMX19_02422	0.89	-0.1
2,543,407	-				-1.1
2,543,407	-				-0.5
2,543,588	+				+1.3
2,543,588	+				+0.4
2,543,588	+				-1.9
2,543,588	+				-0.3
2,543,588	+				+0.1
2,543,588	+				+0.3
2,543,589	-				-3.3
2,543,589	-				-0.2
2,543,589	-				+1.0
2,543,589	-				+0.7
2,543,589	-				-2.1
2,543,589	-				-0.4
2,543,591	+				+0.3
2,543,591	+				-1.5
2,543,591	+				+0.1
2,543,591	+				-0.9
2,543,591	+				-0.6
2,543,591	+				-1.3
2,543,591	+				-1.2
2,543,591	+				-0.3
2,543,591	+				+1.7
2,543,591	+				-0.7
2,543,591	+				+0.0
2,543,591	+				-1.2
2,543,591	+				-1.1
2,543,591	+				-0.7
2,543,591	+				+2.4
2,543,591	+				+0.2
2,543,592	-				-1.2
2,543,592	-				+1.2
2,543,592	-				+0.2
2,543,592	-				-0.3
2,543,592	-				-1.8
2,543,592	-				-0.5
2,543,592	-				-0.5
2,543,592	-				-0.2
2,543,592	-				+0.5
2,543,592	-				+0.3
2,543,592	-				-0.5
2,543,592	-				+1.2
2,543,592	-				-0.8
2,543,592	-				+0.1
2,543,592	-				-2.1
2,543,592	-				-0.6
2,543,592	-				-0.8
2,543,597	+				+0.7
2,543,597	+				-1.5
2,543,597	+				+0.2
2,543,597	+				-1.8
2,543,597	+				+1.0
2,543,597	+				-1.8
2,543,598	-				+0.6
2,543,598	-				+0.4
2,543,604	+				+0.0
2,543,604	+				-2.1
2,543,604	+				-1.5
2,543,604	+				+0.9
2,543,604	+				-2.1
2,543,604	+				+2.1
2,543,604	+				-0.9
2,543,604	+				-1.1
2,543,604	+				-0.6
2,543,605	-				+0.7
2,543,605	-				-1.6
2,543,605	-				-2.0
2,543,605	-				-0.6
2,543,605	-				-0.9
2,543,615	+				-1.9
2,543,615	+				-0.9
2,543,615	+				+1.0
2,543,615	+				+1.1
2,543,616	-				+0.3
2,543,616	-				-0.1
2,543,616	-				-1.1
2,543,703	+				+0.5
2,543,703	+				+1.0
2,543,703	+				-0.9
2,543,703	+				-0.0
2,543,703	+				-0.6
2,543,703	+				+1.3
2,543,703	+				-0.8
2,543,703	+				+0.4
2,543,703	+				-1.9
2,543,703	+				+0.3
2,543,703	+				+0.7
2,543,703	+				-0.2
2,543,703	+				-0.1
2,543,703	+				-0.9
2,543,703	+				-0.0
2,543,703	+				-0.4
2,543,703	+				-1.8
2,543,703	+				+0.1
2,543,703	+				-0.5
2,543,703	+				-0.2
2,543,703	+				+0.7
2,543,703	+				+0.2
2,543,703	+				-0.9
2,543,703	+				-0.5
2,543,703	+				+0.0
2,543,703	+				-0.4
2,543,703	+				-0.0
2,543,703	+				-0.3
2,543,703	+				-0.8
2,543,703	+				-0.0
2,543,703	+				+0.6
2,543,703	+				-0.6
2,543,703	+				+0.5
2,543,703	+				+0.4
2,543,703	+				-0.5
2,543,704	-				-0.9
2,543,704	-				-0.3
2,543,704	-				+0.4
2,543,704	-				+0.7
2,543,704	-				-0.6
2,543,704	-				-1.1
2,543,704	-				-0.4
2,543,704	-				-0.5
2,543,704	-				-0.8
2,543,704	-				+0.4
2,543,704	-				-1.7
2,543,704	-				-0.3
2,543,704	-				-1.9
2,543,704	-				-1.5
2,543,704	-				+1.1
2,543,704	-				+0.1
2,543,704	-				+0.6
2,543,704	-				-1.2
2,543,704	-				-0.6
2,543,704	-				-0.6
2,543,704	-				-1.9
2,543,704	-				+1.2
2,543,704	-				+0.8
2,543,704	-				-1.8
2,543,704	-				+1.3
2,543,704	-				+1.7
2,543,704	-				+0.4
2,543,704	-				-0.8
2,543,704	-				-0.5
2,543,704	-				-1.2
2,543,704	-				-1.5
2,543,704	-				-2.8
2,543,828	+		MPMX19_02423	0.15	-0.7
2,543,828	+		MPMX19_02423	0.15	+0.9
2,543,828	+		MPMX19_02423	0.15	+1.2
2,543,828	+		MPMX19_02423	0.15	-0.4
2,543,828	+		MPMX19_02423	0.15	-0.6
2,543,828	+		MPMX19_02423	0.15	-0.4
2,543,828	+		MPMX19_02423	0.15	-3.1
2,543,828	+		MPMX19_02423	0.15	+0.4
2,543,828	+		MPMX19_02423	0.15	+0.3
2,543,828	+		MPMX19_02423	0.15	+1.1
2,543,828	+		MPMX19_02423	0.15	+0.1
2,543,828	+		MPMX19_02423	0.15	-0.8
2,543,828	+		MPMX19_02423	0.15	-1.7
2,543,828	+		MPMX19_02423	0.15	+0.6
2,543,828	+		MPMX19_02423	0.15	-0.6
2,543,828	+		MPMX19_02423	0.15	-0.2
2,543,828	+		MPMX19_02423	0.15	+0.5
2,543,828	+		MPMX19_02423	0.15	-0.1
2,543,828	+		MPMX19_02423	0.15	-0.6
2,543,828	+		MPMX19_02423	0.15	-2.1
2,543,829	-		MPMX19_02423	0.15	-0.1
2,543,829	-		MPMX19_02423	0.15	-2.3
2,543,829	-		MPMX19_02423	0.15	-1.1
2,543,829	-		MPMX19_02423	0.15	+1.1
2,543,829	-		MPMX19_02423	0.15	-0.6
2,543,829	-		MPMX19_02423	0.15	-1.5
2,543,829	-		MPMX19_02423	0.15	+1.1
2,543,829	-		MPMX19_02423	0.15	-0.4
2,543,829	-		MPMX19_02423	0.15	-0.4
2,543,829	-		MPMX19_02423	0.15	-1.0
2,543,829	-		MPMX19_02423	0.15	-0.7
2,543,829	-		MPMX19_02423	0.15	-1.0
2,543,829	-		MPMX19_02423	0.15	-0.9
2,543,829	-		MPMX19_02423	0.15	+0.5
2,543,829	-		MPMX19_02423	0.15	+1.2
2,543,829	-		MPMX19_02423	0.15	-0.8
2,543,829	-		MPMX19_02423	0.15	+0.4
2,543,829	-		MPMX19_02423	0.15	-0.6
2,543,829	-		MPMX19_02423	0.15	-0.6
2,543,829	-		MPMX19_02423	0.15	+0.1
2,543,829	-		MPMX19_02423	0.15	-0.2
2,543,972	+		MPMX19_02423	0.30	+0.7
2,543,972	+		MPMX19_02423	0.30	-0.2
2,543,972	+		MPMX19_02423	0.30	-1.5
2,543,972	+		MPMX19_02423	0.30	-0.9
2,543,973	-		MPMX19_02423	0.30	+0.8
2,543,973	-		MPMX19_02423	0.30	-1.2
2,543,973	-		MPMX19_02423	0.30	-0.5
2,544,002	+		MPMX19_02423	0.34	-1.2
2,544,002	+		MPMX19_02423	0.34	-0.2
2,544,002	+		MPMX19_02423	0.34	+0.3
2,544,002	+		MPMX19_02423	0.34	+1.1
2,544,002	+		MPMX19_02423	0.34	-0.5
2,544,002	+		MPMX19_02423	0.34	-1.1
2,544,002	+		MPMX19_02423	0.34	-0.1
2,544,002	+		MPMX19_02423	0.34	-1.9
2,544,002	+		MPMX19_02423	0.34	-0.7
2,544,002	+		MPMX19_02423	0.34	-2.1
2,544,002	+		MPMX19_02423	0.34	-0.4
2,544,002	+		MPMX19_02423	0.34	-1.0
2,544,002	+		MPMX19_02423	0.34	-0.8
2,544,002	+		MPMX19_02423	0.34	-0.2
2,544,002	+		MPMX19_02423	0.34	-1.6
2,544,002	+		MPMX19_02423	0.34	-0.9
2,544,002	+		MPMX19_02423	0.34	+0.3
2,544,002	+		MPMX19_02423	0.34	-1.8
2,544,002	+		MPMX19_02423	0.34	-2.5
2,544,002	+		MPMX19_02423	0.34	+0.2
2,544,002	+		MPMX19_02423	0.34	-0.3
2,544,002	+		MPMX19_02423	0.34	-0.3
2,544,003	-		MPMX19_02423	0.34	+1.1
2,544,003	-		MPMX19_02423	0.34	-1.9
2,544,003	-		MPMX19_02423	0.34	-0.1
2,544,003	-		MPMX19_02423	0.34	-0.9
2,544,003	-		MPMX19_02423	0.34	-0.2
2,544,003	-		MPMX19_02423	0.34	+0.1
2,544,003	-		MPMX19_02423	0.34	-0.8
2,544,003	-		MPMX19_02423	0.34	-0.9
2,544,003	-		MPMX19_02423	0.34	+1.0
2,544,003	-		MPMX19_02423	0.34	+0.3