Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01890

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,972,231	+		MPMX19_01889	0.74	-0.3
1,972,630	-				-1.6
1,972,630	-				-2.5
1,972,630	-				+0.4
1,972,630	-				-0.6
1,972,630	-				-0.1
1,972,712	+				+0.1
1,972,712	+				-0.2
1,972,713	-				+0.2
1,972,713	-				+1.1
1,972,735	+				-0.4
1,972,735	+				+0.3
1,972,735	+				-1.5
1,972,735	+				+0.8
1,972,735	+				-1.1
1,972,736	-				-0.4
1,972,736	-				-0.0
1,972,736	-				-0.5
1,972,736	-				-1.5
1,972,769	+				-0.4
1,972,769	+				-0.2
1,972,769	+				-0.1
1,972,769	+				+1.0
1,972,769	+				-0.1
1,972,769	+				+0.6
1,972,769	+				-1.8
1,972,770	-				-0.5
1,972,770	-				-0.1
1,972,770	-				+0.9
1,972,770	-				-0.4
1,972,770	-				-1.8
1,972,770	-				+0.7
1,972,770	-				-1.5
1,972,770	-				+1.2
1,972,821	+				+0.1
1,972,821	+				-0.3
1,972,821	+				-0.7
1,972,821	+				-0.6
1,972,821	+				+0.4
1,972,821	+				-0.1
1,972,821	+				-0.5
1,972,821	+				-1.2
1,972,822	-				-1.5
1,972,822	-				-0.7
1,972,822	-				-0.5
1,972,822	-				+0.9
1,972,896	+		MPMX19_01890	0.19	-2.4
1,972,896	+		MPMX19_01890	0.19	-0.3
1,972,896	+		MPMX19_01890	0.19	-0.7
1,972,896	+		MPMX19_01890	0.19	-0.9
1,972,897	-		MPMX19_01890	0.19	-0.6
1,972,897	-		MPMX19_01890	0.19	+0.8
1,972,897	-		MPMX19_01890	0.19	-0.1
1,973,358	+		MPMX19_01890	0.88	+0.0
1,973,358	+		MPMX19_01890	0.88	-1.8
1,973,358	+		MPMX19_01890	0.88	+0.7
1,973,358	+		MPMX19_01890	0.88	+0.9
1,973,358	+		MPMX19_01890	0.88	-0.5
1,973,358	+		MPMX19_01890	0.88	+0.2
1,973,358	+		MPMX19_01890	0.88	-0.8
1,973,358	+		MPMX19_01890	0.88	+0.3
1,973,358	+		MPMX19_01890	0.88	-0.4
1,973,358	+		MPMX19_01890	0.88	-0.5
1,973,358	+		MPMX19_01890	0.88	+1.3
1,973,358	+		MPMX19_01890	0.88	+0.1
1,973,358	+		MPMX19_01890	0.88	+0.4
1,973,358	+		MPMX19_01890	0.88	-0.2
1,973,358	+		MPMX19_01890	0.88	-1.0
1,973,358	+		MPMX19_01890	0.88	-2.0
1,973,358	+		MPMX19_01890	0.88	+0.1
1,973,358	+		MPMX19_01890	0.88	-1.6
1,973,358	+		MPMX19_01890	0.88	+0.9
1,973,358	+		MPMX19_01890	0.88	+0.0
1,973,358	+		MPMX19_01890	0.88	-0.2
1,973,358	+		MPMX19_01890	0.88	-0.6
1,973,358	+		MPMX19_01890	0.88	+0.7
1,973,358	+		MPMX19_01890	0.88	-0.9
1,973,359	-		MPMX19_01890	0.88	-0.7
1,973,359	-		MPMX19_01890	0.88	-0.4
1,973,359	-		MPMX19_01890	0.88	+0.5
1,973,359	-		MPMX19_01890	0.88	-0.4
1,973,359	-		MPMX19_01890	0.88	-2.3
1,973,359	-		MPMX19_01890	0.88	-0.8
1,973,359	-		MPMX19_01890	0.88	+0.3
1,973,359	-		MPMX19_01890	0.88	-0.5
1,973,359	-		MPMX19_01890	0.88	+0.2
1,973,359	-		MPMX19_01890	0.88	+0.6
1,973,359	-		MPMX19_01890	0.88	-0.4
1,973,359	-		MPMX19_01890	0.88	+0.7
1,973,359	-		MPMX19_01890	0.88	+0.9
1,973,359	-		MPMX19_01890	0.88	-1.5
1,973,359	-		MPMX19_01890	0.88	+1.5
1,973,359	-		MPMX19_01890	0.88	-0.1
1,973,359	-		MPMX19_01890	0.88	-0.2
1,973,359	-		MPMX19_01890	0.88	-2.3
1,973,359	-		MPMX19_01890	0.88	-0.6
1,973,359	-		MPMX19_01890	0.88	-0.8
1,973,359	-		MPMX19_01890	0.88	-0.5
1,973,359	-		MPMX19_01890	0.88	-0.1
1,973,359	-		MPMX19_01890	0.88	+0.4
1,973,359	-		MPMX19_01890	0.88	-1.0
1,973,359	-		MPMX19_01890	0.88	-0.2
1,973,359	-		MPMX19_01890	0.88	-0.6
1,973,359	-		MPMX19_01890	0.88	+1.5
1,973,359	-		MPMX19_01890	0.88	-0.4
1,973,359	-		MPMX19_01890	0.88	-1.3
1,973,359	-		MPMX19_01890	0.88	+0.4
1,973,359	-		MPMX19_01890	0.88	-1.3
1,973,359	-		MPMX19_01890	0.88	+0.6
1,973,359	-		MPMX19_01890	0.88	-0.2
1,973,359	-		MPMX19_01890	0.88	-0.4
1,973,359	-		MPMX19_01890	0.88	+0.4
1,973,359	-		MPMX19_01890	0.88	+0.4
1,973,405	+				-1.5
1,973,405	+				+0.2
1,973,406	-				-1.8
1,973,406	-				-0.7
1,973,406	-				+0.1
1,973,406	-				-0.5
1,973,406	-				-0.4
1,973,406	-				+0.7
1,973,406	-				-0.9
1,973,436	+				-0.7
1,973,436	+				-2.5
1,973,436	+				+0.6
1,973,436	+				-0.4
1,973,436	+				+0.3
1,973,436	+				-0.5
1,973,436	+				-0.7
1,973,436	+				-0.8
1,973,436	+				-0.1
1,973,436	+				+0.5
1,973,436	+				-0.3
1,973,436	+				-1.6
1,973,436	+				+1.0
1,973,437	-				-1.9
1,973,437	-				-1.6
1,973,437	-				-0.2
1,973,437	-				+0.2
1,973,437	-				-0.2
1,973,437	-				-0.8
1,973,437	-				-1.9
1,973,437	-				-0.2
1,973,437	-				-0.5
1,973,437	-				-1.8
1,973,465	+				-1.6
1,973,471	+				-1.5
1,973,510	+				-0.8
1,973,510	+				-1.1
1,973,510	+				-1.6
1,973,511	-				-0.2
1,973,511	-				+0.7
1,973,557	-				-3.4
1,973,791	+		MPMX19_01891	0.38	-1.6
1,973,791	+		MPMX19_01891	0.38	-0.3
1,973,791	+		MPMX19_01891	0.38	+0.4
1,973,791	+		MPMX19_01891	0.38	-1.1
1,973,791	+		MPMX19_01891	0.38	+0.3
1,973,791	+		MPMX19_01891	0.38	-0.8
1,973,791	+		MPMX19_01891	0.38	-0.8
1,973,791	+		MPMX19_01891	0.38	-0.4
1,973,792	-		MPMX19_01891	0.38	-1.7
1,973,792	-		MPMX19_01891	0.38	-0.1
1,973,792	-		MPMX19_01891	0.38	-1.3
1,973,792	-		MPMX19_01891	0.38	-0.4
1,973,792	-		MPMX19_01891	0.38	-0.9
1,973,792	-		MPMX19_01891	0.38	-1.7
1,973,792	-		MPMX19_01891	0.38	-3.6
1,973,792	-		MPMX19_01891	0.38	+0.4
1,973,792	-		MPMX19_01891	0.38	-0.8
1,973,792	-		MPMX19_01891	0.38	-0.6
1,973,792	-		MPMX19_01891	0.38	-1.2
1,973,845	+		MPMX19_01891	0.47	-0.5
1,973,846	-		MPMX19_01891	0.48	+0.5
1,973,929	+		MPMX19_01891	0.62	+0.0
1,973,929	+		MPMX19_01891	0.62	+0.4
1,973,929	+		MPMX19_01891	0.62	-1.3
1,973,929	+		MPMX19_01891	0.62	-0.7
1,973,929	+		MPMX19_01891	0.62	-1.4
1,973,930	-		MPMX19_01891	0.62	-0.7
1,973,930	-		MPMX19_01891	0.62	-0.1
1,973,930	-		MPMX19_01891	0.62	-2.3
1,973,930	-		MPMX19_01891	0.62	-1.5
1,973,930	-		MPMX19_01891	0.62	+0.3
1,973,930	-		MPMX19_01891	0.62	-1.2
1,973,930	-		MPMX19_01891	0.62	-0.5
1,973,956	+		MPMX19_01891	0.67	-0.8
1,973,983	+		MPMX19_01891	0.72	+0.3
1,973,983	+		MPMX19_01891	0.72	-2.1
1,973,983	+		MPMX19_01891	0.72	-0.2
1,973,983	+		MPMX19_01891	0.72	-1.8
1,973,983	+		MPMX19_01891	0.72	+0.2
1,973,983	+		MPMX19_01891	0.72	+0.1
1,973,983	+		MPMX19_01891	0.72	-0.4
1,973,983	+		MPMX19_01891	0.72	+0.5
1,973,983	+		MPMX19_01891	0.72	-1.6
1,973,984	-		MPMX19_01891	0.72	+0.0
1,973,984	-		MPMX19_01891	0.72	-0.7
1,973,984	-		MPMX19_01891	0.72	-1.5
1,973,984	-		MPMX19_01891	0.72	-0.5
1,973,984	-		MPMX19_01891	0.72	+0.7
1,973,984	-		MPMX19_01891	0.72	-1.3
1,973,984	-		MPMX19_01891	0.72	+1.5
1,973,984	-		MPMX19_01891	0.72	-0.8
1,973,984	-		MPMX19_01891	0.72	-1.1
1,974,142	+				-2.0
1,974,143	-				-1.0
1,974,143	-				+0.5
1,974,227	+				-1.3
1,974,227	+				-2.3
1,974,227	+				-0.2
1,974,227	+				+0.8
1,974,228	-				-0.6
1,974,228	-				-0.1
1,974,228	-				-2.1
1,974,228	-				-1.5
1,974,228	-				-1.6
1,974,287	+				+1.2
1,974,310	-				-1.8
1,974,322	+		MPMX19_01892	0.13	+0.2
1,974,322	+		MPMX19_01892	0.13	-1.3
1,974,322	+		MPMX19_01892	0.13	-2.2
1,974,322	+		MPMX19_01892	0.13	+0.4
1,974,322	+		MPMX19_01892	0.13	-1.5
1,974,322	+		MPMX19_01892	0.13	+0.5
1,974,322	+		MPMX19_01892	0.13	+0.2
1,974,322	+		MPMX19_01892	0.13	-0.2
1,974,322	+		MPMX19_01892	0.13	+0.5
1,974,322	+		MPMX19_01892	0.13	-0.3
1,974,322	+		MPMX19_01892	0.13	-2.4
1,974,322	+		MPMX19_01892	0.13	+0.5
1,974,323	-		MPMX19_01892	0.14	+0.4
1,974,323	-		MPMX19_01892	0.14	-0.9
1,974,323	-		MPMX19_01892	0.14	-1.1
1,974,323	-		MPMX19_01892	0.14	+0.3
1,974,323	-		MPMX19_01892	0.14	-0.6
1,974,323	-		MPMX19_01892	0.14	-0.9
1,974,323	-		MPMX19_01892	0.14	-1.0
1,974,323	-		MPMX19_01892	0.14	+1.5
1,974,323	-		MPMX19_01892	0.14	-0.7