Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01540

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,610,640	+				-1.9
1,610,640	+				-0.9
1,610,640	+				-0.8
1,610,640	+				+0.2
1,610,640	+				+0.0
1,610,641	-				-2.2
1,610,641	-				-2.2
1,610,641	-				+1.0
1,610,641	-				-0.3
1,610,641	-				+0.4
1,610,641	-				+0.5
1,610,641	-				-0.5
1,610,641	-				-2.7
1,610,641	-				-0.2
1,610,641	-				-0.7
1,610,641	-				-0.6
1,610,650	+				-1.7
1,610,651	-				+0.9
1,610,651	-				-1.5
1,610,651	-				-1.4
1,610,656	+				-0.7
1,610,656	+				+1.0
1,610,657	-				+0.9
1,610,657	-				-0.2
1,610,657	-				-0.4
1,610,657	-				+0.7
1,610,657	-				-0.2
1,610,657	-				+0.3
1,610,657	-				+0.4
1,610,657	-				-2.2
1,610,657	-				-0.2
1,610,657	-				-0.4
1,610,657	-				+0.0
1,610,657	-				-0.1
1,610,657	-				-1.3
1,610,657	-				+0.7
1,610,657	-				-0.7
1,610,657	-				-0.7
1,610,657	-				+0.9
1,610,723	+				+0.6
1,610,862	-		MPMX19_01539	0.19	-1.1
1,610,862	-		MPMX19_01539	0.19	-0.9
1,611,010	+		MPMX19_01539	0.36	-0.7
1,611,010	+		MPMX19_01539	0.36	-0.1
1,611,011	-		MPMX19_01539	0.36	+0.3
1,611,151	+		MPMX19_01539	0.53	+0.3
1,611,151	+		MPMX19_01539	0.53	-2.0
1,611,151	+		MPMX19_01539	0.53	+0.3
1,611,151	+		MPMX19_01539	0.53	-0.4
1,611,151	+		MPMX19_01539	0.53	+0.0
1,611,151	+		MPMX19_01539	0.53	-0.1
1,611,151	+		MPMX19_01539	0.53	-0.8
1,611,151	+		MPMX19_01539	0.53	+0.5
1,611,151	+		MPMX19_01539	0.53	-0.5
1,611,151	+		MPMX19_01539	0.53	+0.3
1,611,151	+		MPMX19_01539	0.53	-0.8
1,611,151	+		MPMX19_01539	0.53	+0.8
1,611,151	+		MPMX19_01539	0.53	-1.7
1,611,151	+		MPMX19_01539	0.53	-0.3
1,611,151	+		MPMX19_01539	0.53	-0.4
1,611,151	+		MPMX19_01539	0.53	-0.2
1,611,151	+		MPMX19_01539	0.53	-0.8
1,611,151	+		MPMX19_01539	0.53	-0.2
1,611,151	+		MPMX19_01539	0.53	-1.1
1,611,151	+		MPMX19_01539	0.53	-1.4
1,611,152	-		MPMX19_01539	0.53	-0.4
1,611,152	-		MPMX19_01539	0.53	-0.7
1,611,152	-		MPMX19_01539	0.53	-0.8
1,611,152	-		MPMX19_01539	0.53	+0.4
1,611,152	-		MPMX19_01539	0.53	-0.8
1,611,152	-		MPMX19_01539	0.53	-1.3
1,611,152	-		MPMX19_01539	0.53	-2.0
1,611,152	-		MPMX19_01539	0.53	-2.2
1,611,152	-		MPMX19_01539	0.53	+0.3
1,611,152	-		MPMX19_01539	0.53	-0.5
1,611,152	-		MPMX19_01539	0.53	+0.2
1,611,152	-		MPMX19_01539	0.53	-1.1
1,611,152	-		MPMX19_01539	0.53	-0.9
1,611,152	-		MPMX19_01539	0.53	-0.5
1,611,152	-		MPMX19_01539	0.53	+0.4
1,611,152	-		MPMX19_01539	0.53	+1.2
1,611,152	-		MPMX19_01539	0.53	-0.2
1,611,152	-		MPMX19_01539	0.53	-1.1
1,611,152	-		MPMX19_01539	0.53	+0.5
1,611,152	-		MPMX19_01539	0.53	-1.9
1,611,152	-		MPMX19_01539	0.53	-0.7
1,611,152	-		MPMX19_01539	0.53	-0.2
1,611,152	-		MPMX19_01539	0.53	-0.4
1,611,211	+		MPMX19_01539	0.60	+0.1
1,611,211	+		MPMX19_01539	0.60	+0.1
1,611,462	+		MPMX19_01539	0.90	+0.1
1,611,462	+		MPMX19_01539	0.90	-1.7
1,611,463	-		MPMX19_01539	0.90	+0.1
1,611,463	-		MPMX19_01539	0.90	-0.6
1,611,555	-				-0.3
1,611,636	+				-0.1
1,611,747	+				-1.2
1,611,999	+		MPMX19_01540	0.19	+0.6
1,611,999	+		MPMX19_01540	0.19	-0.2
1,611,999	+		MPMX19_01540	0.19	-1.7
1,611,999	+		MPMX19_01540	0.19	+0.0
1,611,999	+		MPMX19_01540	0.19	+0.1
1,611,999	+		MPMX19_01540	0.19	-2.4
1,611,999	+		MPMX19_01540	0.19	-0.9
1,612,000	-		MPMX19_01540	0.19	-1.5
1,612,000	-		MPMX19_01540	0.19	-1.5
1,612,000	-		MPMX19_01540	0.19	-0.7
1,612,000	-		MPMX19_01540	0.19	-1.4
1,612,000	-		MPMX19_01540	0.19	+0.2
1,612,038	+		MPMX19_01540	0.21	-1.7
1,612,038	+		MPMX19_01540	0.21	-0.2
1,612,038	+		MPMX19_01540	0.21	-1.3
1,612,038	+		MPMX19_01540	0.21	-0.9
1,612,038	+		MPMX19_01540	0.21	-0.1
1,612,038	+		MPMX19_01540	0.21	-0.4
1,612,038	+		MPMX19_01540	0.21	-1.6
1,612,038	+		MPMX19_01540	0.21	-2.6
1,612,038	+		MPMX19_01540	0.21	+1.1
1,612,038	+		MPMX19_01540	0.21	+0.9
1,612,038	+		MPMX19_01540	0.21	-0.3
1,612,038	+		MPMX19_01540	0.21	-1.7
1,612,038	+		MPMX19_01540	0.21	-0.8
1,612,038	+		MPMX19_01540	0.21	-0.1
1,612,039	-		MPMX19_01540	0.21	-1.8
1,612,039	-		MPMX19_01540	0.21	-2.5
1,612,039	-		MPMX19_01540	0.21	-0.6
1,612,039	-		MPMX19_01540	0.21	-0.4
1,612,039	-		MPMX19_01540	0.21	-2.3
1,612,039	-		MPMX19_01540	0.21	-0.9
1,612,039	-		MPMX19_01540	0.21	-0.1
1,612,039	-		MPMX19_01540	0.21	-0.3
1,612,185	+		MPMX19_01540	0.27	-0.4
1,612,185	+		MPMX19_01540	0.27	+0.5
1,612,185	+		MPMX19_01540	0.27	+1.0
1,612,185	+		MPMX19_01540	0.27	-1.8
1,612,185	+		MPMX19_01540	0.27	-1.7
1,612,185	+		MPMX19_01540	0.27	-0.8
1,612,185	+		MPMX19_01540	0.27	-1.5
1,612,185	+		MPMX19_01540	0.27	-0.8
1,612,185	+		MPMX19_01540	0.27	-1.2
1,612,185	+		MPMX19_01540	0.27	-1.3
1,612,185	+		MPMX19_01540	0.27	+1.1
1,612,185	+		MPMX19_01540	0.27	+0.2
1,612,186	-		MPMX19_01540	0.27	+1.0
1,612,186	-		MPMX19_01540	0.27	-1.1
1,612,186	-		MPMX19_01540	0.27	-0.0
1,612,186	-		MPMX19_01540	0.27	+0.5
1,612,368	+		MPMX19_01540	0.36	+0.2
1,612,368	+		MPMX19_01540	0.36	-0.8
1,612,368	+		MPMX19_01540	0.36	-0.5
1,612,368	+		MPMX19_01540	0.36	-2.6
1,612,368	+		MPMX19_01540	0.36	+0.8
1,612,368	+		MPMX19_01540	0.36	-0.5
1,612,368	+		MPMX19_01540	0.36	-1.1
1,612,368	+		MPMX19_01540	0.36	-0.4
1,612,368	+		MPMX19_01540	0.36	-2.3
1,612,369	-		MPMX19_01540	0.36	-2.4
1,612,369	-		MPMX19_01540	0.36	-0.1
1,612,369	-		MPMX19_01540	0.36	-1.3
1,612,369	-		MPMX19_01540	0.36	-0.1
1,612,369	-		MPMX19_01540	0.36	-1.1
1,612,452	+		MPMX19_01540	0.39	+0.3
1,612,452	+		MPMX19_01540	0.39	-0.4
1,612,452	+		MPMX19_01540	0.39	-0.9
1,612,452	+		MPMX19_01540	0.39	-1.7
1,612,452	+		MPMX19_01540	0.39	-1.3
1,612,452	+		MPMX19_01540	0.39	-0.7
1,612,452	+		MPMX19_01540	0.39	-1.1
1,612,452	+		MPMX19_01540	0.39	-0.6
1,612,452	+		MPMX19_01540	0.39	-0.4
1,612,452	+		MPMX19_01540	0.39	-3.2
1,612,452	+		MPMX19_01540	0.39	-0.3
1,612,452	+		MPMX19_01540	0.39	-1.5
1,612,452	+		MPMX19_01540	0.39	-0.9
1,612,452	+		MPMX19_01540	0.39	-1.5
1,612,452	+		MPMX19_01540	0.39	-0.2
1,612,452	+		MPMX19_01540	0.39	+0.2
1,612,452	+		MPMX19_01540	0.39	-0.1
1,612,452	+		MPMX19_01540	0.39	-0.1
1,612,453	-		MPMX19_01540	0.39	-1.8
1,612,453	-		MPMX19_01540	0.39	+0.1
1,612,453	-		MPMX19_01540	0.39	-1.0
1,612,453	-		MPMX19_01540	0.39	-1.1
1,612,453	-		MPMX19_01540	0.39	+0.4
1,612,453	-		MPMX19_01540	0.39	-0.7
1,612,453	-		MPMX19_01540	0.39	-1.2
1,612,453	-		MPMX19_01540	0.39	-1.1
1,612,453	-		MPMX19_01540	0.39	-0.2
1,612,453	-		MPMX19_01540	0.39	+0.1
1,612,453	-		MPMX19_01540	0.39	-0.8
1,612,453	-		MPMX19_01540	0.39	-1.6
1,612,453	-		MPMX19_01540	0.39	-2.9
1,612,453	-		MPMX19_01540	0.39	-1.2
1,612,453	-		MPMX19_01540	0.39	+1.3
1,612,453	-		MPMX19_01540	0.39	+0.1
1,612,482	+		MPMX19_01540	0.41	-1.5
1,612,482	+		MPMX19_01540	0.41	+0.9
1,612,482	+		MPMX19_01540	0.41	-0.7
1,612,482	+		MPMX19_01540	0.41	-1.1
1,612,482	+		MPMX19_01540	0.41	-2.0
1,612,482	+		MPMX19_01540	0.41	+0.1
1,612,483	-		MPMX19_01540	0.41	+0.1
1,612,483	-		MPMX19_01540	0.41	-1.8
1,612,483	-		MPMX19_01540	0.41	-1.3
1,612,483	-		MPMX19_01540	0.41	-1.0
1,612,483	-		MPMX19_01540	0.41	+0.1
1,612,503	+		MPMX19_01540	0.42	-1.6
1,612,503	+		MPMX19_01540	0.42	+0.3
1,612,503	+		MPMX19_01540	0.42	+0.9
1,612,503	+		MPMX19_01540	0.42	+0.1
1,612,503	+		MPMX19_01540	0.42	-0.3
1,612,503	+		MPMX19_01540	0.42	+0.2
1,612,503	+		MPMX19_01540	0.42	-1.4
1,612,503	+		MPMX19_01540	0.42	-0.1
1,612,503	+		MPMX19_01540	0.42	-0.4
1,612,503	+		MPMX19_01540	0.42	-1.8
1,612,503	+		MPMX19_01540	0.42	+1.5
1,612,504	-		MPMX19_01540	0.42	-0.5
1,612,504	-		MPMX19_01540	0.42	-0.3
1,612,504	-		MPMX19_01540	0.42	-1.1
1,612,504	-		MPMX19_01540	0.42	-0.3
1,612,504	-		MPMX19_01540	0.42	-0.8
1,612,504	-		MPMX19_01540	0.42	+0.7
1,612,504	-		MPMX19_01540	0.42	-0.1
1,612,758	+		MPMX19_01540	0.53	-0.5
1,612,758	+		MPMX19_01540	0.53	+0.1
1,612,758	+		MPMX19_01540	0.53	-2.3
1,612,758	+		MPMX19_01540	0.53	-0.9
1,612,758	+		MPMX19_01540	0.53	-0.6
1,612,758	+		MPMX19_01540	0.53	-1.1
1,612,758	+		MPMX19_01540	0.53	-1.0
1,612,758	+		MPMX19_01540	0.53	-0.1
1,612,758	+		MPMX19_01540	0.53	-1.0
1,612,758	+		MPMX19_01540	0.53	-1.2
1,612,758	+		MPMX19_01540	0.53	-1.3
1,612,758	+		MPMX19_01540	0.53	+0.5
1,612,758	+		MPMX19_01540	0.53	-2.5
1,612,759	-		MPMX19_01540	0.53	-0.1
1,612,759	-		MPMX19_01540	0.53	-1.2
1,612,759	-		MPMX19_01540	0.53	+0.7
1,612,759	-		MPMX19_01540	0.53	-0.7
1,612,759	-		MPMX19_01540	0.53	-0.8
1,612,759	-		MPMX19_01540	0.53	-0.6
1,612,759	-		MPMX19_01540	0.53	-1.3
1,612,782	+		MPMX19_01540	0.54	-0.9
1,612,782	+		MPMX19_01540	0.54	-0.9
1,612,782	+		MPMX19_01540	0.54	-1.1
1,612,783	-		MPMX19_01540	0.54	-1.1
1,612,783	-		MPMX19_01540	0.54	-1.5
1,612,783	-		MPMX19_01540	0.54	+0.1
1,612,783	-		MPMX19_01540	0.54	-0.4
1,612,783	-		MPMX19_01540	0.54	-0.5
1,612,783	-		MPMX19_01540	0.54	-1.3
1,612,788	+		MPMX19_01540	0.54	-0.7
1,612,838	+		MPMX19_01540	0.56	+0.8
1,612,838	+		MPMX19_01540	0.56	+0.5
1,612,838	+		MPMX19_01540	0.56	+0.3
1,612,838	+		MPMX19_01540	0.56	-0.9
1,612,838	+		MPMX19_01540	0.56	-0.9
1,612,838	+		MPMX19_01540	0.56	-1.3
1,612,839	-		MPMX19_01540	0.56	-0.8
1,612,839	-		MPMX19_01540	0.56	-1.1
1,612,839	-		MPMX19_01540	0.56	-0.6
1,612,839	-		MPMX19_01540	0.56	+0.4
1,612,839	-		MPMX19_01540	0.56	+0.1
1,613,034	+		MPMX19_01540	0.65	-0.8
1,613,034	+		MPMX19_01540	0.65	-0.2
1,613,034	+		MPMX19_01540	0.65	-1.0
1,613,034	+		MPMX19_01540	0.65	+0.4
1,613,034	+		MPMX19_01540	0.65	-0.8
1,613,034	+		MPMX19_01540	0.65	-1.4
1,613,034	+		MPMX19_01540	0.65	-0.6
1,613,034	+		MPMX19_01540	0.65	-0.1
1,613,035	-		MPMX19_01540	0.65	-0.4
1,613,035	-		MPMX19_01540	0.65	-1.1
1,613,035	-		MPMX19_01540	0.65	-0.1
1,613,035	-		MPMX19_01540	0.65	-0.2
1,613,035	-		MPMX19_01540	0.65	-0.8
1,613,035	-		MPMX19_01540	0.65	-0.9
1,613,035	-		MPMX19_01540	0.65	-1.1
1,613,882	-				-2.7
1,613,937	+				-0.4
1,613,937	+				+0.7
1,613,937	+				+0.1
1,613,937	+				+0.7
1,613,938	-				-2.1
1,614,066	+				-2.7
1,614,067	-				-0.4
1,614,067	-				-1.3
1,614,084	+				-0.1
1,614,084	+				+0.5
1,614,084	+				-1.3
1,614,084	+				+0.1
1,614,084	+				-0.7
1,614,084	+				+0.0
1,614,084	+				-0.8
1,614,084	+				-1.7
1,614,084	+				-0.9
1,614,084	+				+0.5
1,614,084	+				-1.3
1,614,084	+				-0.8
1,614,084	+				-0.1
1,614,084	+				-1.4
1,614,084	+				+0.7
1,614,084	+				-0.7
1,614,084	+				-0.3
1,614,085	-				+1.8
1,614,085	-				+1.1
1,614,085	-				+0.5
1,614,085	-				-0.5
1,614,085	-				-0.1
1,614,085	-				-0.0
1,614,085	-				-2.3
1,614,085	-				+0.5
1,614,085	-				+1.2
1,614,085	-				-0.7
1,614,085	-				+0.5
1,614,085	-				+0.0
1,614,085	-				+0.1
1,614,085	-				-0.1
1,614,085	-				-1.2
1,614,132	+				-0.3
1,614,132	+				+0.4
1,614,133	-				-1.9
1,614,133	-				+0.3
1,614,186	+				+0.4
1,614,186	+				+0.2
1,614,186	+				+0.8
1,614,186	+				-0.6
1,614,186	+				-0.5
1,614,186	+				-0.1
1,614,186	+				+0.5
1,614,187	-				-1.4
1,614,203	-				-0.0
1,614,203	-				-0.7
1,614,203	-				+0.1
1,614,325	+		MPMX19_01541	0.49	-0.2
1,614,437	+		MPMX19_01541	0.84	-0.9
1,614,437	+		MPMX19_01541	0.84	-1.7
1,614,437	+		MPMX19_01541	0.84	-1.3
1,614,437	+		MPMX19_01541	0.84	-0.1
1,614,437	+		MPMX19_01541	0.84	-0.7
1,614,438	-		MPMX19_01541	0.84	-0.8
1,614,438	-		MPMX19_01541	0.84	+0.1
1,614,438	-		MPMX19_01541	0.84	-1.7
1,614,438	-		MPMX19_01541	0.84	+0.7
1,614,438	-		MPMX19_01541	0.84	+1.8
1,614,438	-		MPMX19_01541	0.84	-0.2
1,614,510	+				-1.5
1,614,511	-				-0.2
1,614,511	-				-3.3
1,614,525	+				-0.2
1,614,525	+				-0.5
1,614,525	+				-0.8
1,614,525	+				-2.3
1,614,526	-				-0.2
1,614,526	-				+0.4
1,614,526	-				-0.1
1,614,526	-				-0.9
1,614,526	-				-1.0
1,614,526	-				+1.0
1,614,526	-				-1.9
1,614,526	-				+0.0
1,614,526	-				-0.8
1,614,526	-				+0.5
1,614,528	+				+0.3
1,614,528	+				-1.3
1,614,529	-				-0.9
1,614,529	-				+0.5
1,614,577	-				-1.3
1,614,577	-				+0.2
1,614,653	-				-2.4
1,614,741	+				+1.4
1,614,741	+				+0.5
1,614,742	-				-1.0