Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01148

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,183,285	+				+0.7
1,183,330	+				-2.3
1,183,331	-				-0.0
1,183,331	-				-1.0
1,183,771	-		MPMX19_01147	0.44	-1.1
1,183,771	-		MPMX19_01147	0.44	-1.7
1,183,873	-		MPMX19_01147	0.58	+0.2
1,183,873	-		MPMX19_01147	0.58	+0.0
1,183,901	-		MPMX19_01147	0.61	-0.1
1,183,954	+		MPMX19_01147	0.68	+1.7
1,183,954	+		MPMX19_01147	0.68	+0.6
1,183,954	+		MPMX19_01147	0.68	+0.1
1,183,954	+		MPMX19_01147	0.68	+0.5
1,183,954	+		MPMX19_01147	0.68	-0.8
1,183,955	-		MPMX19_01147	0.68	-0.1
1,183,955	-		MPMX19_01147	0.68	-0.7
1,184,005	-		MPMX19_01147	0.75	-0.8
1,184,085	+		MPMX19_01147	0.85	-0.9
1,184,085	+		MPMX19_01147	0.85	-0.0
1,184,085	+		MPMX19_01147	0.85	+0.6
1,184,085	+		MPMX19_01147	0.85	-1.1
1,184,085	+		MPMX19_01147	0.85	-0.4
1,184,086	-		MPMX19_01147	0.85	-2.2
1,184,086	-		MPMX19_01147	0.85	+0.9
1,184,086	-		MPMX19_01147	0.85	-1.1
1,184,086	-		MPMX19_01147	0.85	+0.3
1,184,086	-		MPMX19_01147	0.85	-0.2
1,184,086	-		MPMX19_01147	0.85	-1.1
1,184,086	-		MPMX19_01147	0.85	-1.9
1,184,086	-		MPMX19_01147	0.85	+0.8
1,184,086	-		MPMX19_01147	0.85	-0.3
1,184,086	-		MPMX19_01147	0.85	-0.3
1,184,116	+		MPMX19_01147	0.89	-0.9
1,184,116	+		MPMX19_01147	0.89	-1.3
1,184,116	+		MPMX19_01147	0.89	-0.3
1,184,116	+		MPMX19_01147	0.89	-0.6
1,184,116	+		MPMX19_01147	0.89	-0.2
1,184,116	+		MPMX19_01147	0.89	-0.7
1,184,116	+		MPMX19_01147	0.89	-0.9
1,184,117	-		MPMX19_01147	0.90	-0.4
1,184,254	+				-1.5
1,184,254	+				+0.9
1,184,255	-				+0.7
1,184,255	-				-0.5
1,184,255	-				-1.1
1,184,268	+				-0.5
1,184,571	+		MPMX19_01148	0.19	-1.0
1,184,571	+		MPMX19_01148	0.19	-0.5
1,184,634	+		MPMX19_01148	0.23	-0.0
1,184,635	-		MPMX19_01148	0.23	-1.5
1,184,878	-		MPMX19_01148	0.39	-0.0
1,184,878	-		MPMX19_01148	0.39	-2.0
1,185,078	+		MPMX19_01148	0.52	-0.4
1,185,078	+		MPMX19_01148	0.52	-1.3
1,185,078	+		MPMX19_01148	0.52	+0.5
1,185,078	+		MPMX19_01148	0.52	-0.9
1,185,078	+		MPMX19_01148	0.52	-0.9
1,185,078	+		MPMX19_01148	0.52	-1.1
1,185,078	+		MPMX19_01148	0.52	-1.5
1,185,078	+		MPMX19_01148	0.52	-2.4
1,185,078	+		MPMX19_01148	0.52	-0.3
1,185,078	+		MPMX19_01148	0.52	+0.6
1,185,078	+		MPMX19_01148	0.52	-2.1
1,185,078	+		MPMX19_01148	0.52	-1.5
1,185,079	-		MPMX19_01148	0.52	-2.0
1,185,079	-		MPMX19_01148	0.52	-1.2
1,185,079	-		MPMX19_01148	0.52	+0.9
1,185,079	-		MPMX19_01148	0.52	-1.3
1,185,079	-		MPMX19_01148	0.52	-0.9
1,185,079	-		MPMX19_01148	0.52	-2.0
1,185,079	-		MPMX19_01148	0.52	-0.6
1,185,079	-		MPMX19_01148	0.52	-0.5
1,185,079	-		MPMX19_01148	0.52	-0.1
1,185,079	-		MPMX19_01148	0.52	-1.5
1,185,079	-		MPMX19_01148	0.52	+0.2
1,185,079	-		MPMX19_01148	0.52	-0.3
1,185,118	+		MPMX19_01148	0.54	-0.5
1,185,118	+		MPMX19_01148	0.54	-1.1
1,185,118	+		MPMX19_01148	0.54	-1.1
1,185,119	-		MPMX19_01148	0.54	+0.5
1,185,119	-		MPMX19_01148	0.54	-1.4
1,185,119	-		MPMX19_01148	0.54	-1.4
1,185,119	-		MPMX19_01148	0.54	-1.5
1,185,119	-		MPMX19_01148	0.54	+0.9
1,185,119	-		MPMX19_01148	0.54	-0.1
1,185,119	-		MPMX19_01148	0.54	-1.7
1,185,160	-		MPMX19_01148	0.57	-1.1
1,185,687	+				+0.5
1,185,687	+				-0.1
1,185,687	+				-0.9
1,185,687	+				-0.1
1,185,687	+				+0.2
1,185,687	+				-0.4
1,185,687	+				-0.8
1,185,688	-				-0.9
1,185,688	-				+0.7
1,185,688	-				+0.5
1,185,688	-				+0.8
1,185,688	-				+0.8
1,185,835	+				-0.5
1,185,835	+				-0.3
1,185,835	+				-0.9
1,185,835	+				+0.2
1,185,835	+				-0.1
1,185,835	+				-0.4
1,185,835	+				-0.7
1,185,836	-				-1.9
1,185,836	-				-1.2
1,185,836	-				-2.3
1,185,836	-				-0.3
1,185,836	-				-1.9
1,185,836	-				+1.7
1,185,836	-				-0.2
1,185,836	-				-0.5
1,185,836	-				-1.4
1,185,836	-				+0.3
1,185,836	-				-1.0
1,185,836	-				-0.9
1,185,836	-				-0.1
1,185,900	+				+0.1
1,185,901	-				-1.2
1,185,901	-				-0.1
1,185,901	-				-0.9
1,185,950	+				+0.5
1,185,950	+				-0.3
1,185,950	+				+0.7
1,185,950	+				-0.9
1,185,950	+				-1.6
1,185,950	+				-0.5
1,185,950	+				+0.9
1,185,950	+				-1.7
1,185,950	+				+0.1
1,185,951	-				-0.8
1,185,951	-				+0.1
1,185,951	-				-0.4
1,185,951	-				-0.3
1,185,951	-				-2.3
1,185,951	-				-0.3
1,185,951	-				-1.2
1,185,951	-				-0.4
1,185,951	-				-1.1
1,185,951	-				-0.8
1,185,951	-				+0.5
1,185,954	+				+0.2
1,185,954	+				+0.5
1,185,954	+				-1.3
1,185,955	-				-0.5
1,185,955	-				-1.1
1,185,955	-				-1.6
1,185,995	+				+1.2
1,185,995	+				+0.9
1,185,995	+				+0.3
1,185,995	+				-0.9
1,185,995	+				-0.5
1,185,995	+				-0.3
1,185,995	+				-1.7
1,185,996	-				+0.2
1,185,996	-				+0.2
1,185,996	-				+0.9
1,185,996	-				-1.7
1,185,996	-				+0.6
1,185,996	-				-1.2
1,186,343	+		MPMX19_01149	0.23	+0.0
1,186,343	+		MPMX19_01149	0.23	+0.9
1,186,343	+		MPMX19_01149	0.23	-1.5
1,186,343	+		MPMX19_01149	0.23	-0.1
1,186,343	+		MPMX19_01149	0.23	-0.7
1,186,343	+		MPMX19_01149	0.23	-0.9
1,186,344	-		MPMX19_01149	0.23	-0.1
1,186,344	-		MPMX19_01149	0.23	-0.7
1,186,344	-		MPMX19_01149	0.23	-0.1
1,186,344	-		MPMX19_01149	0.23	-0.1
1,186,344	-		MPMX19_01149	0.23	+1.1
1,186,344	-		MPMX19_01149	0.23	+0.5
1,186,344	-		MPMX19_01149	0.23	-0.4
1,186,344	-		MPMX19_01149	0.23	-2.0
1,186,344	-		MPMX19_01149	0.23	+0.9
1,186,511	+		MPMX19_01149	0.30	-0.4
1,186,589	+		MPMX19_01149	0.34	+0.8
1,186,613	+		MPMX19_01149	0.35	-1.3
1,186,613	+		MPMX19_01149	0.35	-0.9
1,186,613	+		MPMX19_01149	0.35	-0.1
1,186,614	-		MPMX19_01149	0.35	-0.3
1,186,614	-		MPMX19_01149	0.35	+1.5
1,186,614	-		MPMX19_01149	0.35	-0.9
1,186,614	-		MPMX19_01149	0.35	-0.3
1,186,637	+		MPMX19_01149	0.36	+0.5
1,186,637	+		MPMX19_01149	0.36	-1.9
1,186,637	+		MPMX19_01149	0.36	-0.3
1,186,637	+		MPMX19_01149	0.36	+0.1
1,186,637	+		MPMX19_01149	0.36	-0.9
1,186,637	+		MPMX19_01149	0.36	-0.3
1,186,637	+		MPMX19_01149	0.36	+0.7
1,186,637	+		MPMX19_01149	0.36	+0.3
1,186,637	+		MPMX19_01149	0.36	-0.9
1,186,637	+		MPMX19_01149	0.36	+0.7
1,186,638	-		MPMX19_01149	0.36	-0.3
1,186,638	-		MPMX19_01149	0.36	+0.6
1,186,638	-		MPMX19_01149	0.36	-1.5
1,186,712	+		MPMX19_01149	0.40	-1.1
1,186,712	+		MPMX19_01149	0.40	-0.1
1,186,712	+		MPMX19_01149	0.40	+0.3
1,186,713	-		MPMX19_01149	0.40	+0.7