Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01110

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,142,757	+				-0.2
1,142,757	+				+1.0
1,142,758	-				-2.5
1,142,758	-				-1.1
1,142,798	+				-0.3
1,142,798	+				+0.3
1,142,798	+				+1.0
1,142,798	+				-0.5
1,142,798	+				-0.1
1,142,799	-				-1.1
1,143,035	+		MPMX19_01109	0.36	-0.7
1,143,035	+		MPMX19_01109	0.36	-0.5
1,143,035	+		MPMX19_01109	0.36	+0.2
1,143,035	+		MPMX19_01109	0.36	-0.1
1,143,035	+		MPMX19_01109	0.36	+1.5
1,143,035	+		MPMX19_01109	0.36	+0.5
1,143,035	+		MPMX19_01109	0.36	+0.7
1,143,036	-		MPMX19_01109	0.36	-0.2
1,143,036	-		MPMX19_01109	0.36	-0.3
1,143,036	-		MPMX19_01109	0.36	-1.7
1,143,101	-		MPMX19_01109	0.44	-0.5
1,143,101	-		MPMX19_01109	0.44	+0.8
1,143,101	-		MPMX19_01109	0.44	+0.8
1,143,152	+		MPMX19_01109	0.50	+0.9
1,143,152	+		MPMX19_01109	0.50	-0.4
1,143,152	+		MPMX19_01109	0.50	+0.3
1,143,152	+		MPMX19_01109	0.50	-0.4
1,143,152	+		MPMX19_01109	0.50	-0.4
1,143,152	+		MPMX19_01109	0.50	-2.7
1,143,152	+		MPMX19_01109	0.50	+0.6
1,143,152	+		MPMX19_01109	0.50	-0.1
1,143,152	+		MPMX19_01109	0.50	+1.1
1,143,152	+		MPMX19_01109	0.50	+0.5
1,143,152	+		MPMX19_01109	0.50	-2.1
1,143,152	+		MPMX19_01109	0.50	-0.6
1,143,153	-		MPMX19_01109	0.50	+0.3
1,143,153	-		MPMX19_01109	0.50	+1.0
1,143,153	-		MPMX19_01109	0.50	+0.2
1,143,153	-		MPMX19_01109	0.50	-0.5
1,143,153	-		MPMX19_01109	0.50	+0.5
1,143,153	-		MPMX19_01109	0.50	+0.1
1,143,153	-		MPMX19_01109	0.50	+0.2
1,143,153	-		MPMX19_01109	0.50	+2.5
1,143,153	-		MPMX19_01109	0.50	-1.6
1,143,153	-		MPMX19_01109	0.50	-0.5
1,143,153	-		MPMX19_01109	0.50	+0.6
1,143,153	-		MPMX19_01109	0.50	-0.3
1,143,153	-		MPMX19_01109	0.50	-0.4
1,143,153	-		MPMX19_01109	0.50	+0.9
1,143,153	-		MPMX19_01109	0.50	-1.0
1,143,153	-		MPMX19_01109	0.50	-1.2
1,143,153	-		MPMX19_01109	0.50	-1.8
1,143,153	-		MPMX19_01109	0.50	-1.5
1,143,153	-		MPMX19_01109	0.50	-0.1
1,143,153	-		MPMX19_01109	0.50	+0.5
1,143,153	-		MPMX19_01109	0.50	-1.2
1,143,177	+		MPMX19_01109	0.53	+0.1
1,143,178	-		MPMX19_01109	0.53	+0.5
1,143,347	+		MPMX19_01109	0.73	+0.5
1,143,348	-		MPMX19_01109	0.73	+0.9
1,143,348	-		MPMX19_01109	0.73	-0.8
1,143,348	-		MPMX19_01109	0.73	+0.7
1,143,348	-		MPMX19_01109	0.73	+1.3
1,143,348	-		MPMX19_01109	0.73	-0.1
1,143,348	-		MPMX19_01109	0.73	-0.4
1,143,348	-		MPMX19_01109	0.73	+0.3
1,143,382	+		MPMX19_01109	0.77	-0.7
1,143,382	+		MPMX19_01109	0.77	-1.3
1,143,382	+		MPMX19_01109	0.77	-2.2
1,143,382	+		MPMX19_01109	0.77	+0.5
1,143,382	+		MPMX19_01109	0.77	+0.3
1,143,382	+		MPMX19_01109	0.77	-2.1
1,143,382	+		MPMX19_01109	0.77	+0.4
1,143,382	+		MPMX19_01109	0.77	-2.0
1,143,382	+		MPMX19_01109	0.77	-0.5
1,143,382	+		MPMX19_01109	0.77	-1.4
1,143,382	+		MPMX19_01109	0.77	-0.9
1,143,382	+		MPMX19_01109	0.77	-0.2
1,143,382	+		MPMX19_01109	0.77	-0.2
1,143,382	+		MPMX19_01109	0.77	+0.9
1,143,382	+		MPMX19_01109	0.77	-0.7
1,143,382	+		MPMX19_01109	0.77	-0.9
1,143,382	+		MPMX19_01109	0.77	+0.8
1,143,382	+		MPMX19_01109	0.77	-0.7
1,143,383	-		MPMX19_01109	0.78	-2.1
1,143,383	-		MPMX19_01109	0.78	-0.9
1,143,383	-		MPMX19_01109	0.78	-1.6
1,143,383	-		MPMX19_01109	0.78	-0.3
1,143,383	-		MPMX19_01109	0.78	+0.2
1,143,383	-		MPMX19_01109	0.78	+0.9
1,143,383	-		MPMX19_01109	0.78	-1.1
1,143,383	-		MPMX19_01109	0.78	-2.9
1,143,383	-		MPMX19_01109	0.78	+0.1
1,143,383	-		MPMX19_01109	0.78	-0.5
1,143,383	-		MPMX19_01109	0.78	-1.6
1,143,383	-		MPMX19_01109	0.78	-0.9
1,143,383	-		MPMX19_01109	0.78	+0.2
1,143,383	-		MPMX19_01109	0.78	-0.7
1,143,383	-		MPMX19_01109	0.78	-0.8
1,143,383	-		MPMX19_01109	0.78	+0.1
1,143,383	-		MPMX19_01109	0.78	+2.5
1,143,383	-		MPMX19_01109	0.78	-1.3
1,143,491	+				+0.5
1,143,491	+				+0.1
1,143,491	+				-1.1
1,143,491	+				-1.0
1,143,491	+				-0.1
1,143,491	+				-0.2
1,143,491	+				-0.9
1,143,491	+				+1.0
1,143,492	-				+0.7
1,143,492	-				-0.5
1,143,492	-				-1.2
1,143,492	-				-0.1
1,143,492	-				-1.1
1,143,492	-				-1.3
1,143,607	+				-1.0
1,143,608	-				-0.9
1,143,608	-				-0.7
1,143,668	+				+0.0
1,143,732	+				-0.9
1,143,732	+				-1.4
1,143,732	+				+0.5
1,143,732	+				+0.5
1,143,732	+				-0.5
1,143,732	+				+0.3
1,143,732	+				-0.1
1,143,732	+				+0.5
1,144,071	+		MPMX19_01110	0.35	-1.3
1,144,071	+		MPMX19_01110	0.35	-1.1
1,144,259	+		MPMX19_01110	0.54	-1.3
1,144,259	+		MPMX19_01110	0.54	-1.8
1,144,260	-		MPMX19_01110	0.54	+0.0
1,144,283	+		MPMX19_01110	0.57	-0.8
1,144,283	+		MPMX19_01110	0.57	+0.4
1,144,283	+		MPMX19_01110	0.57	+0.0
1,144,283	+		MPMX19_01110	0.57	-0.7
1,144,283	+		MPMX19_01110	0.57	-0.5
1,144,283	+		MPMX19_01110	0.57	-0.3
1,144,283	+		MPMX19_01110	0.57	-0.4
1,144,283	+		MPMX19_01110	0.57	+0.6
1,144,283	+		MPMX19_01110	0.57	-0.0
1,144,283	+		MPMX19_01110	0.57	+0.5
1,144,283	+		MPMX19_01110	0.57	-1.1
1,144,283	+		MPMX19_01110	0.57	-2.0
1,144,283	+		MPMX19_01110	0.57	+0.1
1,144,283	+		MPMX19_01110	0.57	+0.1
1,144,283	+		MPMX19_01110	0.57	+0.9
1,144,283	+		MPMX19_01110	0.57	-1.3
1,144,283	+		MPMX19_01110	0.57	-0.5
1,144,283	+		MPMX19_01110	0.57	-0.3
1,144,283	+		MPMX19_01110	0.57	-0.5
1,144,283	+		MPMX19_01110	0.57	-1.2
1,144,283	+		MPMX19_01110	0.57	+0.5
1,144,283	+		MPMX19_01110	0.57	-0.0
1,144,283	+		MPMX19_01110	0.57	-0.1
1,144,283	+		MPMX19_01110	0.57	-0.5
1,144,283	+		MPMX19_01110	0.57	-0.6
1,144,283	+		MPMX19_01110	0.57	-0.6
1,144,283	+		MPMX19_01110	0.57	-0.1
1,144,284	+		MPMX19_01110	0.57	-0.9
1,144,284	-		MPMX19_01110	0.57	-1.5
1,144,284	-		MPMX19_01110	0.57	-1.9
1,144,284	-		MPMX19_01110	0.57	-1.5
1,144,412	+		MPMX19_01110	0.70	+0.5
1,144,412	+		MPMX19_01110	0.70	-2.8
1,144,412	+		MPMX19_01110	0.70	-0.1
1,144,412	+		MPMX19_01110	0.70	-0.5
1,144,412	+		MPMX19_01110	0.70	-0.3
1,144,412	+		MPMX19_01110	0.70	-0.2
1,144,412	+		MPMX19_01110	0.70	-1.5
1,144,412	+		MPMX19_01110	0.70	-0.9
1,144,448	+		MPMX19_01110	0.73	-1.1
1,144,448	+		MPMX19_01110	0.73	+0.8
1,144,448	+		MPMX19_01110	0.73	-0.1
1,144,448	+		MPMX19_01110	0.73	-1.2
1,144,448	+		MPMX19_01110	0.73	-1.4
1,144,448	+		MPMX19_01110	0.73	+2.3
1,144,448	+		MPMX19_01110	0.73	-0.1
1,144,448	+		MPMX19_01110	0.73	-0.4
1,144,449	-		MPMX19_01110	0.73	-1.1
1,144,538	+		MPMX19_01110	0.82	+1.2
1,144,538	+		MPMX19_01110	0.82	-0.6
1,144,538	+		MPMX19_01110	0.82	+0.3
1,144,586	+		MPMX19_01110	0.87	-1.2
1,144,586	+		MPMX19_01110	0.87	-1.2
1,144,586	+		MPMX19_01110	0.87	+1.2
1,144,679	+				+0.9
1,144,679	+				-1.5
1,144,679	+				+0.7
1,144,679	+				+0.9
1,144,679	+				-2.0
1,144,679	+				-0.3
1,144,679	+				+1.0
1,144,679	+				+0.8
1,144,679	+				+0.1
1,144,679	+				-0.5
1,144,679	+				-0.1
1,144,679	+				-1.8
1,144,679	+				+1.7
1,144,679	+				+0.2
1,144,679	+				-0.2
1,144,679	+				-0.1
1,144,679	+				-0.0
1,144,679	+				-0.9
1,144,679	+				-1.7
1,144,679	+				-1.0
1,144,679	+				-1.3
1,144,679	+				-1.2
1,144,680	-				-1.1
1,144,680	-				-1.1
1,144,680	-				-2.1
1,144,680	-				-0.3
1,145,429	+		MPMX19_01111	0.59	+0.2
1,145,446	+		MPMX19_01111	0.60	+0.0
1,145,446	+		MPMX19_01111	0.60	-1.3
1,145,572	+		MPMX19_01111	0.71	-2.2
1,145,572	+		MPMX19_01111	0.71	-1.0
1,145,572	+		MPMX19_01111	0.71	-0.7
1,145,572	+		MPMX19_01111	0.71	-2.2
1,145,572	+		MPMX19_01111	0.71	-1.1
1,145,572	+		MPMX19_01111	0.71	-0.1