Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00967

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,007,120	+		MPMX19_00966	0.88	-1.3
1,007,216	+				+0.0
1,007,216	+				-0.8
1,007,216	+				-0.3
1,007,216	+				-1.3
1,007,216	+				-0.1
1,007,216	+				+1.1
1,007,216	+				-0.4
1,007,216	+				-0.7
1,007,216	+				-1.5
1,007,216	+				-2.3
1,007,216	+				+0.1
1,007,216	+				-0.1
1,007,216	+				-0.0
1,007,216	+				-0.8
1,007,217	-				-0.6
1,007,217	-				-0.2
1,007,217	-				-0.5
1,007,217	-				-1.9
1,007,217	-				+1.3
1,007,217	-				-1.2
1,007,217	-				-0.5
1,007,217	-				-1.6
1,007,217	-				-1.1
1,007,217	-				-0.3
1,007,217	-				+0.1
1,007,217	-				+0.2
1,007,217	-				+0.1
1,007,217	-				+0.3
1,007,217	-				-1.2
1,007,255	+				-1.9
1,007,255	+				-0.3
1,007,256	-				-0.5
1,007,256	-				+0.7
1,007,256	-				+0.3
1,007,256	-				+1.6
1,007,256	-				-0.0
1,007,256	-				+0.5
1,007,256	-				-1.3
1,007,379	-				+0.7
1,007,379	-				-1.1
1,007,448	+				-2.2
1,007,448	+				+0.0
1,007,448	+				+0.1
1,007,448	+				+0.3
1,007,448	+				+0.8
1,007,449	-				+0.7
1,007,449	-				-3.2
1,007,449	-				-1.4
1,007,449	-				+0.5
1,007,449	-				-1.2
1,007,485	+				-1.5
1,007,485	+				-1.1
1,007,485	+				-0.5
1,007,485	+				-0.1
1,007,486	-				-0.3
1,007,486	-				-0.3
1,007,530	-				+0.0
1,007,667	+		MPMX19_00967	0.11	-1.4
1,007,667	+		MPMX19_00967	0.11	-0.3
1,007,667	+		MPMX19_00967	0.11	+0.5
1,007,667	+		MPMX19_00967	0.11	+0.3
1,007,667	+		MPMX19_00967	0.11	-0.5
1,007,667	+		MPMX19_00967	0.11	-1.5
1,007,667	+		MPMX19_00967	0.11	-0.5
1,007,667	+		MPMX19_00967	0.11	+1.1
1,007,667	+		MPMX19_00967	0.11	-0.1
1,007,667	+		MPMX19_00967	0.11	+0.7
1,007,667	+		MPMX19_00967	0.11	-0.4
1,007,667	+		MPMX19_00967	0.11	-2.1
1,007,667	+		MPMX19_00967	0.11	+1.5
1,007,667	+		MPMX19_00967	0.11	+0.0
1,007,667	+		MPMX19_00967	0.11	-1.2
1,007,667	+		MPMX19_00967	0.11	-0.1
1,007,668	-		MPMX19_00967	0.11	-0.5
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	+1.1
1,007,668	-		MPMX19_00967	0.11	-0.0
1,007,668	-		MPMX19_00967	0.11	-0.3
1,007,668	-		MPMX19_00967	0.11	-0.5
1,007,668	-		MPMX19_00967	0.11	+1.2
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	-1.1
1,007,668	-		MPMX19_00967	0.11	-0.1
1,007,668	-		MPMX19_00967	0.11	-1.2
1,007,668	-		MPMX19_00967	0.11	-0.3
1,007,668	-		MPMX19_00967	0.11	-1.6
1,007,668	-		MPMX19_00967	0.11	-1.1
1,007,668	-		MPMX19_00967	0.11	-0.3
1,007,668	-		MPMX19_00967	0.11	-0.1
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	-0.9
1,007,668	-		MPMX19_00967	0.11	+0.5
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	-0.2
1,007,668	-		MPMX19_00967	0.11	-0.6
1,007,847	+		MPMX19_00967	0.32	+0.7
1,007,847	+		MPMX19_00967	0.32	-0.6
1,007,847	+		MPMX19_00967	0.32	-0.6
1,007,847	+		MPMX19_00967	0.32	+0.2
1,007,847	+		MPMX19_00967	0.32	+0.5
1,007,847	+		MPMX19_00967	0.32	-0.3
1,007,847	+		MPMX19_00967	0.32	-0.5
1,007,847	+		MPMX19_00967	0.32	-1.8
1,007,847	+		MPMX19_00967	0.32	-0.1
1,007,847	+		MPMX19_00967	0.32	-0.1
1,007,847	+		MPMX19_00967	0.32	+0.1
1,007,847	+		MPMX19_00967	0.32	-0.2
1,007,847	+		MPMX19_00967	0.32	-1.8
1,007,847	+		MPMX19_00967	0.32	+0.7
1,007,847	+		MPMX19_00967	0.32	-1.1
1,007,847	+		MPMX19_00967	0.32	-1.2
1,007,847	+		MPMX19_00967	0.32	-1.6
1,007,847	+		MPMX19_00967	0.32	-0.1
1,007,847	+		MPMX19_00967	0.32	-1.4
1,007,847	+		MPMX19_00967	0.32	+0.9
1,007,847	+		MPMX19_00967	0.32	-0.9
1,007,848	-		MPMX19_00967	0.32	-3.0
1,007,848	-		MPMX19_00967	0.32	-0.3
1,007,848	-		MPMX19_00967	0.32	+1.0
1,007,848	-		MPMX19_00967	0.32	-0.0
1,007,848	-		MPMX19_00967	0.32	-2.0
1,007,848	-		MPMX19_00967	0.32	-0.4
1,007,848	-		MPMX19_00967	0.32	+0.3
1,007,848	-		MPMX19_00967	0.32	+0.2
1,007,848	-		MPMX19_00967	0.32	+1.1
1,007,848	-		MPMX19_00967	0.32	-0.7
1,007,848	-		MPMX19_00967	0.32	-0.2
1,007,848	-		MPMX19_00967	0.32	+1.1
1,007,848	-		MPMX19_00967	0.32	-0.1
1,007,848	-		MPMX19_00967	0.32	-0.0
1,007,848	-		MPMX19_00967	0.32	-2.0
1,007,848	-		MPMX19_00967	0.32	+0.6
1,007,848	-		MPMX19_00967	0.32	+0.2
1,007,848	-		MPMX19_00967	0.32	-1.2
1,007,848	-		MPMX19_00967	0.32	-0.1
1,007,848	-		MPMX19_00967	0.32	-0.0
1,007,848	-		MPMX19_00967	0.32	+1.1
1,008,267	+		MPMX19_00967	0.83	-0.5
1,008,268	-		MPMX19_00967	0.83	+0.4
1,008,381	+				-0.7
1,008,381	+				+0.3
1,008,382	-				-2.0
1,008,601	+		MPMX19_00968	0.24	-0.2
1,008,601	+		MPMX19_00968	0.24	+0.1
1,008,601	+		MPMX19_00968	0.24	-2.8
1,008,602	-		MPMX19_00968	0.24	-0.7
1,008,602	-		MPMX19_00968	0.24	+0.6
1,008,602	-		MPMX19_00968	0.24	-0.8
1,008,602	-		MPMX19_00968	0.24	-0.7
1,008,602	-		MPMX19_00968	0.24	-0.3
1,008,602	-		MPMX19_00968	0.24	-0.5
1,008,721	+		MPMX19_00968	0.39	+0.2
1,008,721	+		MPMX19_00968	0.39	+0.5
1,008,721	+		MPMX19_00968	0.39	-0.5
1,008,721	+		MPMX19_00968	0.39	-0.5
1,008,721	+		MPMX19_00968	0.39	-0.1
1,008,721	+		MPMX19_00968	0.39	-0.2
1,008,721	+		MPMX19_00968	0.39	-1.0
1,008,721	+		MPMX19_00968	0.39	-0.8
1,008,722	-		MPMX19_00968	0.39	-1.0
1,008,722	-		MPMX19_00968	0.39	-0.4
1,008,722	-		MPMX19_00968	0.39	+0.5
1,008,722	-		MPMX19_00968	0.39	-1.0
1,008,722	-		MPMX19_00968	0.39	-0.1
1,008,722	-		MPMX19_00968	0.39	-1.1
1,008,722	-		MPMX19_00968	0.39	-0.1
1,008,722	-		MPMX19_00968	0.39	+0.5
1,008,853	+		MPMX19_00968	0.55	+1.3
1,008,853	+		MPMX19_00968	0.55	+1.1
1,008,853	+		MPMX19_00968	0.55	-1.6
1,008,853	+		MPMX19_00968	0.55	+1.5
1,008,853	+		MPMX19_00968	0.55	-0.6
1,008,853	+		MPMX19_00968	0.55	+0.9
1,008,853	+		MPMX19_00968	0.55	+0.3
1,008,853	+		MPMX19_00968	0.55	-1.2
1,008,854	-		MPMX19_00968	0.55	-0.8
1,008,854	-		MPMX19_00968	0.55	+2.2
1,008,854	-		MPMX19_00968	0.55	-0.5
1,008,854	-		MPMX19_00968	0.55	-0.7
1,008,940	+		MPMX19_00968	0.66	+0.8
1,008,940	+		MPMX19_00968	0.66	+1.2
1,008,940	+		MPMX19_00968	0.66	+0.2
1,008,940	+		MPMX19_00968	0.66	-0.8
1,008,940	+		MPMX19_00968	0.66	-0.3
1,008,940	+		MPMX19_00968	0.66	-0.8
1,008,940	+		MPMX19_00968	0.66	-0.7
1,008,940	+		MPMX19_00968	0.66	-0.7
1,008,940	+		MPMX19_00968	0.66	+0.2
1,008,940	+		MPMX19_00968	0.66	-1.3
1,008,940	+		MPMX19_00968	0.66	-0.7
1,008,940	+		MPMX19_00968	0.66	-0.1
1,008,940	+		MPMX19_00968	0.66	-1.1
1,008,940	+		MPMX19_00968	0.66	-1.3
1,008,940	+		MPMX19_00968	0.66	-0.3
1,008,940	+		MPMX19_00968	0.66	-0.8
1,008,940	+		MPMX19_00968	0.66	-0.5
1,008,940	+		MPMX19_00968	0.66	+0.8
1,008,940	+		MPMX19_00968	0.66	-2.2
1,008,940	+		MPMX19_00968	0.66	-0.7
1,008,940	+		MPMX19_00968	0.66	+1.3
1,008,940	+		MPMX19_00968	0.66	-0.3
1,008,940	+		MPMX19_00968	0.66	-0.4
1,008,940	+		MPMX19_00968	0.66	-1.7
1,008,940	+		MPMX19_00968	0.66	-0.2
1,008,940	+		MPMX19_00968	0.66	-0.6
1,008,941	-		MPMX19_00968	0.66	-1.6
1,008,941	-		MPMX19_00968	0.66	-0.3
1,008,941	-		MPMX19_00968	0.66	-0.7
1,008,941	-		MPMX19_00968	0.66	-0.0
1,008,941	-		MPMX19_00968	0.66	-0.9
1,008,941	-		MPMX19_00968	0.66	-2.7
1,008,941	-		MPMX19_00968	0.66	-0.3
1,008,941	-		MPMX19_00968	0.66	-1.2
1,008,941	-		MPMX19_00968	0.66	-0.7
1,008,941	-		MPMX19_00968	0.66	-1.5
1,008,941	-		MPMX19_00968	0.66	-1.7
1,008,941	-		MPMX19_00968	0.66	-0.3
1,008,941	-		MPMX19_00968	0.66	-0.6
1,008,941	-		MPMX19_00968	0.66	+0.1
1,008,941	-		MPMX19_00968	0.66	+0.7
1,008,941	-		MPMX19_00968	0.66	-0.4
1,008,941	-		MPMX19_00968	0.66	-1.1
1,008,941	-		MPMX19_00968	0.66	-0.2
1,008,941	-		MPMX19_00968	0.66	-1.7
1,008,941	-		MPMX19_00968	0.66	+1.0
1,008,941	-		MPMX19_00968	0.66	-0.9
1,008,941	-		MPMX19_00968	0.66	-2.1
1,008,941	-		MPMX19_00968	0.66	+0.7
1,009,024	+		MPMX19_00968	0.76	-0.8
1,009,024	+		MPMX19_00968	0.76	-0.8
1,009,024	+		MPMX19_00968	0.76	-0.0
1,009,024	+		MPMX19_00968	0.76	-0.2
1,009,024	+		MPMX19_00968	0.76	-1.3
1,009,025	-		MPMX19_00968	0.77	-0.2
1,009,025	-		MPMX19_00968	0.77	+0.9
1,009,025	-		MPMX19_00968	0.77	+0.9
1,009,025	-		MPMX19_00968	0.77	+1.0
1,009,025	-		MPMX19_00968	0.77	-1.3
1,009,025	-		MPMX19_00968	0.77	-0.6
1,009,025	-		MPMX19_00968	0.77	-0.9
1,009,025	-		MPMX19_00968	0.77	-0.3
1,009,221	-				+0.7
1,009,376	+		MPMX19_00969	0.13	-0.5
1,009,376	+		MPMX19_00969	0.13	-1.6
1,009,376	+		MPMX19_00969	0.13	-0.3
1,009,376	+		MPMX19_00969	0.13	-0.5
1,009,376	+		MPMX19_00969	0.13	-0.7
1,009,376	+		MPMX19_00969	0.13	-0.3
1,009,376	+		MPMX19_00969	0.13	+1.5
1,009,376	+		MPMX19_00969	0.13	+0.1
1,009,376	+		MPMX19_00969	0.13	-0.6
1,009,376	+		MPMX19_00969	0.13	+0.5
1,009,376	+		MPMX19_00969	0.13	+1.1
1,009,376	+		MPMX19_00969	0.13	+0.2
1,009,376	+		MPMX19_00969	0.13	-0.3
1,009,376	+		MPMX19_00969	0.13	-1.5
1,009,376	+		MPMX19_00969	0.13	-0.5
1,009,376	+		MPMX19_00969	0.13	+0.2
1,009,376	+		MPMX19_00969	0.13	-0.3
1,009,376	+		MPMX19_00969	0.13	-0.3
1,009,377	-		MPMX19_00969	0.13	+0.1
1,009,377	-		MPMX19_00969	0.13	+0.5
1,009,377	-		MPMX19_00969	0.13	-1.1
1,009,377	-		MPMX19_00969	0.13	-0.0
1,009,377	-		MPMX19_00969	0.13	-1.9
1,009,377	-		MPMX19_00969	0.13	+1.2
1,009,377	-		MPMX19_00969	0.13	+0.2
1,009,377	-		MPMX19_00969	0.13	-0.2
1,009,377	-		MPMX19_00969	0.13	+0.4
1,009,377	-		MPMX19_00969	0.13	-0.0
1,009,377	-		MPMX19_00969	0.13	-1.1
1,009,377	-		MPMX19_00969	0.13	-0.1
1,009,377	-		MPMX19_00969	0.13	+0.0
1,009,377	-		MPMX19_00969	0.13	-1.0
1,009,377	-		MPMX19_00969	0.13	-0.0
1,009,377	-		MPMX19_00969	0.13	-0.1
1,009,379	+		MPMX19_00969	0.13	+0.5
1,009,379	+		MPMX19_00969	0.13	-1.2
1,009,379	+		MPMX19_00969	0.13	-0.4
1,009,379	+		MPMX19_00969	0.13	-1.8
1,009,379	+		MPMX19_00969	0.13	+0.9
1,009,379	+		MPMX19_00969	0.13	+0.5
1,009,379	+		MPMX19_00969	0.13	-1.1
1,009,379	+		MPMX19_00969	0.13	-1.1
1,009,379	+		MPMX19_00969	0.13	-1.2
1,009,379	+		MPMX19_00969	0.13	-1.4
1,009,379	+		MPMX19_00969	0.13	-0.1
1,009,379	+		MPMX19_00969	0.13	-0.0
1,009,380	-		MPMX19_00969	0.13	-0.4
1,009,380	-		MPMX19_00969	0.13	-2.5
1,009,380	-		MPMX19_00969	0.13	-0.3
1,009,380	-		MPMX19_00969	0.13	-1.1
1,009,380	-		MPMX19_00969	0.13	-0.2
1,009,380	-		MPMX19_00969	0.13	+0.6
1,009,380	-		MPMX19_00969	0.13	-2.7