Experiment: M9 with Supernatant from Cyptococcus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2457 and GFF2456 overlap by 2 nucleotides GFF2456 and GFF2458 are separated by 68 nucleotides GFF2458 and GFF2459 overlap by 8 nucleotides
GFF2457 - no description, at 513,791 to 514,078
GFF2457
GFF2456 - no description, at 514,077 to 514,409
GFF2456
GFF2458 - CzcABC family efflux RND transporter, membrane fusion protein, at 514,478 to 515,608
GFF2458
GFF2459 - CzcABC family efflux RND transporter, transmembrane protein, at 515,601 to 518,732
GFF2459
Position (kb) 514
515
516 Strain fitness (log2 ratio) -2
-1
0
1
2 at 513.578 kb on - strand at 513.941 kb on + strand, within GFF2457 at 513.941 kb on + strand, within GFF2457 at 513.941 kb on + strand, within GFF2457 at 513.942 kb on - strand, within GFF2457 at 514.955 kb on + strand, within GFF2458 at 514.955 kb on + strand, within GFF2458 at 514.956 kb on - strand, within GFF2458 at 515.063 kb on + strand, within GFF2458 at 515.064 kb on - strand, within GFF2458 at 515.064 kb on - strand, within GFF2458 at 515.124 kb on - strand, within GFF2458 at 515.288 kb on + strand, within GFF2458 at 515.289 kb on - strand, within GFF2458 at 515.289 kb on - strand, within GFF2458 at 515.457 kb on - strand, within GFF2458 at 515.457 kb on - strand, within GFF2458 at 515.676 kb on + strand at 515.988 kb on + strand, within GFF2459 at 515.988 kb on + strand, within GFF2459 at 515.989 kb on - strand, within GFF2459 at 516.012 kb on + strand, within GFF2459 at 516.012 kb on + strand, within GFF2459 at 516.019 kb on - strand, within GFF2459 at 516.183 kb on + strand, within GFF2459 at 516.273 kb on + strand, within GFF2459 at 516.273 kb on + strand, within GFF2459 at 516.274 kb on - strand, within GFF2459 at 516.274 kb on - strand, within GFF2459
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus remove 513,578 - -0.5 513,941 + GFF2457 0.52 -1.6 513,941 + GFF2457 0.52 +0.9 513,941 + GFF2457 0.52 -0.5 513,942 - GFF2457 0.52 -1.3 514,955 + GFF2458 0.42 -2.3 514,955 + GFF2458 0.42 -1.1 514,956 - GFF2458 0.42 -0.8 515,063 + GFF2458 0.52 -0.2 515,064 - GFF2458 0.52 -1.0 515,064 - GFF2458 0.52 -0.4 515,124 - GFF2458 0.57 +1.8 515,288 + GFF2458 0.72 -0.7 515,289 - GFF2458 0.72 -0.5 515,289 - GFF2458 0.72 -0.7 515,457 - GFF2458 0.87 +0.0 515,457 - GFF2458 0.87 +0.3 515,676 + +1.0 515,988 + GFF2459 0.12 -0.6 515,988 + GFF2459 0.12 -0.7 515,989 - GFF2459 0.12 -0.6 516,012 + GFF2459 0.13 -0.6 516,012 + GFF2459 0.13 +0.8 516,019 - GFF2459 0.13 +0.2 516,183 + GFF2459 0.19 -0.6 516,273 + GFF2459 0.21 +1.6 516,273 + GFF2459 0.21 -1.1 516,274 - GFF2459 0.21 +0.0 516,274 - GFF2459 0.21 -0.2
Or see this region's nucleotide sequence