Experiment: M9 with Supernatant from Cyptococcus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6482 and GFF6483 overlap by 26 nucleotides GFF6483 and GFF6484 are separated by 26 nucleotides GFF6484 and GFF6485 are separated by 102 nucleotides
GFF6482 - Transcriptional regulator, AcrR family, at 61,280 to 61,903
GFF6482
GFF6483 - Serine esterase, at 61,878 to 62,555
GFF6483
GFF6484 - putative oxidoreductase, nitronate monooxygenase family, at 62,582 to 63,634
GFF6484
GFF6485 - hypothetical protein, at 63,737 to 64,711
GFF6485
Position (kb) 62
63
64 Strain fitness (log2 ratio) -2
-1
0
1
2 at 61.692 kb on - strand, within GFF6482 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.362 kb on + strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.363 kb on - strand, within GFF6483 at 62.383 kb on + strand, within GFF6483 at 62.383 kb on + strand, within GFF6483 at 62.383 kb on + strand, within GFF6483 at 62.383 kb on + strand, within GFF6483 at 62.384 kb on - strand, within GFF6483 at 62.384 kb on - strand, within GFF6483 at 62.916 kb on + strand, within GFF6484 at 62.916 kb on + strand, within GFF6484 at 62.916 kb on + strand, within GFF6484 at 62.916 kb on + strand, within GFF6484 at 62.917 kb on - strand, within GFF6484 at 63.357 kb on + strand, within GFF6484 at 63.357 kb on + strand, within GFF6484 at 63.358 kb on - strand, within GFF6484 at 63.358 kb on - strand, within GFF6484 at 63.358 kb on - strand, within GFF6484 at 63.358 kb on - strand, within GFF6484 at 63.361 kb on - strand, within GFF6484 at 63.361 kb on - strand, within GFF6484 at 63.361 kb on - strand, within GFF6484 at 63.361 kb on - strand, within GFF6484 at 64.199 kb on + strand, within GFF6485 at 64.199 kb on + strand, within GFF6485 at 64.199 kb on + strand, within GFF6485 at 64.200 kb on - strand, within GFF6485 at 64.200 kb on - strand, within GFF6485 at 64.259 kb on + strand, within GFF6485 at 64.359 kb on - strand, within GFF6485 at 64.359 kb on - strand, within GFF6485 at 64.359 kb on - strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.524 kb on + strand, within GFF6485 at 64.525 kb on - strand, within GFF6485 at 64.525 kb on - strand, within GFF6485 at 64.525 kb on - strand, within GFF6485
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus remove 61,692 - GFF6482 0.66 -1.0 62,362 + GFF6483 0.71 -2.3 62,362 + GFF6483 0.71 -0.5 62,362 + GFF6483 0.71 -0.2 62,362 + GFF6483 0.71 -1.4 62,362 + GFF6483 0.71 -0.5 62,362 + GFF6483 0.71 -0.9 62,362 + GFF6483 0.71 -0.8 62,363 - GFF6483 0.72 -0.6 62,363 - GFF6483 0.72 +0.8 62,363 - GFF6483 0.72 +0.2 62,363 - GFF6483 0.72 -0.7 62,363 - GFF6483 0.72 -0.9 62,363 - GFF6483 0.72 -1.6 62,363 - GFF6483 0.72 +1.2 62,363 - GFF6483 0.72 +1.8 62,383 + GFF6483 0.74 -0.6 62,383 + GFF6483 0.74 +0.1 62,383 + GFF6483 0.74 +1.6 62,383 + GFF6483 0.74 -0.2 62,384 - GFF6483 0.75 -0.3 62,384 - GFF6483 0.75 -1.9 62,916 + GFF6484 0.32 -0.2 62,916 + GFF6484 0.32 -0.7 62,916 + GFF6484 0.32 -0.7 62,916 + GFF6484 0.32 -0.5 62,917 - GFF6484 0.32 -1.4 63,357 + GFF6484 0.74 -1.6 63,357 + GFF6484 0.74 +0.3 63,358 - GFF6484 0.74 -0.9 63,358 - GFF6484 0.74 -2.7 63,358 - GFF6484 0.74 -0.4 63,358 - GFF6484 0.74 -0.7 63,361 - GFF6484 0.74 -2.2 63,361 - GFF6484 0.74 -0.0 63,361 - GFF6484 0.74 -0.8 63,361 - GFF6484 0.74 -0.0 64,199 + GFF6485 0.47 -0.3 64,199 + GFF6485 0.47 +0.2 64,199 + GFF6485 0.47 +1.3 64,200 - GFF6485 0.47 -0.4 64,200 - GFF6485 0.47 -1.0 64,259 + GFF6485 0.54 -2.2 64,359 - GFF6485 0.64 -0.2 64,359 - GFF6485 0.64 -2.3 64,359 - GFF6485 0.64 +0.2 64,524 + GFF6485 0.81 -0.8 64,524 + GFF6485 0.81 -0.9 64,524 + GFF6485 0.81 -0.1 64,524 + GFF6485 0.81 -1.5 64,524 + GFF6485 0.81 -1.0 64,524 + GFF6485 0.81 -1.1 64,524 + GFF6485 0.81 +1.6 64,525 - GFF6485 0.81 -0.0 64,525 - GFF6485 0.81 -0.6 64,525 - GFF6485 0.81 +0.0
Or see this region's nucleotide sequence