Experiment: M9 with Supernatant from Cyptococcus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF167 and GFF168 overlap by 4 nucleotides GFF168 and GFF169 overlap by 4 nucleotides GFF169 and GFF170 overlap by 11 nucleotides
GFF167 - Two-component system sensor histidine kinase, at 195,697 to 199,197
GFF167
GFF168 - MCP methyltransferase, CheR-type, at 199,194 to 200,060
GFF168
GFF169 - Protein-glutamate methylesterase (EC 3.1.1.61), at 200,057 to 200,659
GFF169
GFF170 - Two-component system sensor histidine kinase/response regulator hybrid, at 200,649 to 201,872
GFF170
Position (kb) 199
200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 198.304 kb on + strand, within GFF167 at 198.304 kb on + strand, within GFF167 at 198.619 kb on + strand, within GFF167 at 198.619 kb on + strand, within GFF167 at 198.902 kb on - strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.120 kb on + strand at 199.121 kb on - strand at 199.121 kb on - strand at 199.121 kb on - strand at 199.290 kb on + strand, within GFF168 at 199.290 kb on + strand, within GFF168 at 199.291 kb on - strand, within GFF168 at 199.291 kb on - strand, within GFF168 at 199.291 kb on - strand, within GFF168 at 199.299 kb on + strand, within GFF168 at 199.299 kb on + strand, within GFF168 at 199.300 kb on - strand, within GFF168 at 199.305 kb on + strand, within GFF168 at 199.305 kb on + strand, within GFF168 at 199.305 kb on + strand, within GFF168 at 199.305 kb on + strand, within GFF168 at 199.306 kb on - strand, within GFF168 at 199.306 kb on - strand, within GFF168 at 199.306 kb on - strand, within GFF168 at 199.307 kb on - strand, within GFF168 at 199.320 kb on + strand, within GFF168 at 199.321 kb on - strand, within GFF168 at 199.486 kb on - strand, within GFF168 at 199.531 kb on - strand, within GFF168 at 199.531 kb on - strand, within GFF168 at 199.635 kb on + strand, within GFF168 at 199.635 kb on + strand, within GFF168 at 199.710 kb on + strand, within GFF168 at 199.710 kb on + strand, within GFF168 at 199.710 kb on + strand, within GFF168 at 199.722 kb on + strand, within GFF168 at 199.723 kb on - strand, within GFF168 at 199.758 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.761 kb on + strand, within GFF168 at 199.762 kb on - strand, within GFF168 at 199.762 kb on - strand, within GFF168 at 199.773 kb on + strand, within GFF168 at 199.774 kb on - strand, within GFF168 at 199.893 kb on + strand, within GFF168 at 199.894 kb on - strand, within GFF168 at 200.043 kb on + strand at 200.044 kb on - strand at 200.175 kb on + strand, within GFF169 at 200.175 kb on + strand, within GFF169 at 200.175 kb on + strand, within GFF169 at 200.175 kb on + strand, within GFF169 at 200.175 kb on + strand, within GFF169 at 200.175 kb on + strand, within GFF169 at 200.176 kb on - strand, within GFF169 at 200.176 kb on - strand, within GFF169 at 200.176 kb on - strand, within GFF169 at 200.303 kb on + strand, within GFF169 at 200.303 kb on + strand, within GFF169 at 200.303 kb on + strand, within GFF169 at 200.303 kb on + strand, within GFF169 at 200.304 kb on - strand, within GFF169 at 200.304 kb on - strand, within GFF169 at 200.304 kb on - strand, within GFF169 at 200.321 kb on + strand, within GFF169 at 200.322 kb on - strand, within GFF169 at 200.322 kb on - strand, within GFF169 at 200.322 kb on - strand, within GFF169 at 200.334 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.471 kb on + strand, within GFF169 at 200.472 kb on - strand, within GFF169 at 200.472 kb on - strand, within GFF169 at 200.472 kb on - strand, within GFF169 at 200.526 kb on + strand, within GFF169 at 200.526 kb on + strand, within GFF169 at 200.526 kb on + strand, within GFF169 at 200.527 kb on - strand, within GFF169 at 200.594 kb on + strand, within GFF169 at 200.594 kb on + strand, within GFF169 at 200.594 kb on + strand, within GFF169 at 200.594 kb on + strand, within GFF169 at 200.595 kb on - strand, within GFF169 at 200.595 kb on - strand, within GFF169 at 200.595 kb on - strand, within GFF169 at 200.595 kb on - strand, within GFF169 at 200.931 kb on + strand, within GFF170 at 200.931 kb on + strand, within GFF170 at 200.932 kb on - strand, within GFF170 at 200.932 kb on - strand, within GFF170 at 200.932 kb on - strand, within GFF170 at 200.946 kb on + strand, within GFF170 at 200.947 kb on - strand, within GFF170
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus remove 198,304 + GFF167 0.74 -1.2 198,304 + GFF167 0.74 +1.0 198,619 + GFF167 0.83 +0.2 198,619 + GFF167 0.83 -0.6 198,902 - -0.9 199,120 + -0.0 199,120 + -0.5 199,120 + -1.6 199,120 + -1.4 199,120 + +1.4 199,120 + -0.4 199,120 + -0.5 199,121 - +0.4 199,121 - +0.9 199,121 - -0.8 199,290 + GFF168 0.11 -1.6 199,290 + GFF168 0.11 -2.5 199,291 - GFF168 0.11 +0.4 199,291 - GFF168 0.11 -1.8 199,291 - GFF168 0.11 -1.1 199,299 + GFF168 0.12 -1.4 199,299 + GFF168 0.12 +0.4 199,300 - GFF168 0.12 -3.4 199,305 + GFF168 0.13 -3.2 199,305 + GFF168 0.13 -1.1 199,305 + GFF168 0.13 +1.1 199,305 + GFF168 0.13 -0.6 199,306 - GFF168 0.13 +1.4 199,306 - GFF168 0.13 -1.6 199,306 - GFF168 0.13 -2.1 199,307 - GFF168 0.13 -1.2 199,320 + GFF168 0.15 -0.5 199,321 - GFF168 0.15 -2.5 199,486 - GFF168 0.34 -2.2 199,531 - GFF168 0.39 -2.6 199,531 - GFF168 0.39 -1.2 199,635 + GFF168 0.51 -1.0 199,635 + GFF168 0.51 -0.6 199,710 + GFF168 0.60 -0.4 199,710 + GFF168 0.60 -1.4 199,710 + GFF168 0.60 -2.6 199,722 + GFF168 0.61 -0.7 199,723 - GFF168 0.61 -1.7 199,758 + GFF168 0.65 -1.6 199,761 + GFF168 0.65 -1.9 199,761 + GFF168 0.65 -0.6 199,761 + GFF168 0.65 +0.8 199,761 + GFF168 0.65 -0.3 199,761 + GFF168 0.65 -0.6 199,761 + GFF168 0.65 -3.2 199,761 + GFF168 0.65 +0.5 199,761 + GFF168 0.65 -0.2 199,762 - GFF168 0.66 -1.9 199,762 - GFF168 0.66 -1.4 199,773 + GFF168 0.67 -1.0 199,774 - GFF168 0.67 -1.6 199,893 + GFF168 0.81 -0.0 199,894 - GFF168 0.81 -1.6 200,043 + -1.8 200,044 - -0.6 200,175 + GFF169 0.20 -1.1 200,175 + GFF169 0.20 -0.2 200,175 + GFF169 0.20 +0.2 200,175 + GFF169 0.20 -1.0 200,175 + GFF169 0.20 -0.3 200,175 + GFF169 0.20 -0.5 200,176 - GFF169 0.20 -0.6 200,176 - GFF169 0.20 -1.6 200,176 - GFF169 0.20 -0.5 200,303 + GFF169 0.41 -0.8 200,303 + GFF169 0.41 -0.9 200,303 + GFF169 0.41 -3.3 200,303 + GFF169 0.41 +0.1 200,304 - GFF169 0.41 -2.6 200,304 - GFF169 0.41 +0.7 200,304 - GFF169 0.41 -0.8 200,321 + GFF169 0.44 -1.5 200,322 - GFF169 0.44 -0.6 200,322 - GFF169 0.44 -0.9 200,322 - GFF169 0.44 +0.1 200,334 + GFF169 0.46 +1.1 200,471 + GFF169 0.69 -0.8 200,471 + GFF169 0.69 +1.4 200,471 + GFF169 0.69 +0.3 200,471 + GFF169 0.69 -0.1 200,471 + GFF169 0.69 -2.1 200,471 + GFF169 0.69 -1.3 200,471 + GFF169 0.69 -2.7 200,471 + GFF169 0.69 -0.7 200,472 - GFF169 0.69 -0.2 200,472 - GFF169 0.69 -0.2 200,472 - GFF169 0.69 -0.2 200,526 + GFF169 0.78 -0.6 200,526 + GFF169 0.78 -0.9 200,526 + GFF169 0.78 -1.1 200,527 - GFF169 0.78 -0.9 200,594 + GFF169 0.89 -1.9 200,594 + GFF169 0.89 -0.5 200,594 + GFF169 0.89 -1.8 200,594 + GFF169 0.89 -2.5 200,595 - GFF169 0.89 -0.9 200,595 - GFF169 0.89 -2.3 200,595 - GFF169 0.89 -1.0 200,595 - GFF169 0.89 -1.6 200,931 + GFF170 0.23 -1.5 200,931 + GFF170 0.23 -0.5 200,932 - GFF170 0.23 -1.2 200,932 - GFF170 0.23 -0.9 200,932 - GFF170 0.23 +3.0 200,946 + GFF170 0.24 +0.6 200,947 - GFF170 0.24 +0.6
Or see this region's nucleotide sequence