Experiment: Galactose 1-phosphate dipotassium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS15580 and ABI39_RS15585 are separated by 402 nucleotides ABI39_RS15585 and ABI39_RS15590 are separated by 26 nucleotides ABI39_RS15590 and ABI39_RS15595 are separated by 19 nucleotides
ABI39_RS15580: ABI39_RS15580 - ribonucleoside-diphosphate reductase subunit alpha, at 4,029,340 to 4,031,859
_RS15580
ABI39_RS15585: ABI39_RS15585 - hypothetical protein, at 4,032,262 to 4,032,471
_RS15585
ABI39_RS15590: ABI39_RS15590 - hypothetical protein, at 4,032,498 to 4,033,055
_RS15590
ABI39_RS15595: ABI39_RS15595 - putative transporter, at 4,033,075 to 4,034,763
_RS15595
Position (kb) 4032
4033
4034 Strain fitness (log2 ratio) -1
0
1 at 4031.528 kb on - strand, within ABI39_RS15580 at 4031.532 kb on + strand, within ABI39_RS15580 at 4031.541 kb on + strand, within ABI39_RS15580 at 4031.542 kb on - strand, within ABI39_RS15580 at 4031.545 kb on - strand, within ABI39_RS15580 at 4031.614 kb on + strand at 4031.615 kb on - strand at 4031.615 kb on - strand at 4031.637 kb on - strand at 4031.686 kb on + strand at 4031.738 kb on - strand at 4031.745 kb on - strand at 4031.873 kb on + strand at 4031.881 kb on - strand at 4032.017 kb on + strand at 4032.230 kb on + strand at 4032.258 kb on - strand at 4032.258 kb on - strand at 4032.387 kb on + strand, within ABI39_RS15585 at 4032.562 kb on - strand, within ABI39_RS15590 at 4032.608 kb on + strand, within ABI39_RS15590 at 4032.803 kb on + strand, within ABI39_RS15590 at 4032.808 kb on - strand, within ABI39_RS15590 at 4032.822 kb on - strand, within ABI39_RS15590 at 4032.847 kb on + strand, within ABI39_RS15590 at 4032.897 kb on + strand, within ABI39_RS15590 at 4032.898 kb on - strand, within ABI39_RS15590 at 4032.901 kb on + strand, within ABI39_RS15590 at 4032.928 kb on + strand, within ABI39_RS15590 at 4032.929 kb on - strand, within ABI39_RS15590 at 4032.929 kb on - strand, within ABI39_RS15590 at 4033.213 kb on - strand at 4033.228 kb on + strand at 4033.253 kb on - strand, within ABI39_RS15595 at 4033.320 kb on - strand, within ABI39_RS15595 at 4033.323 kb on + strand, within ABI39_RS15595 at 4033.332 kb on + strand, within ABI39_RS15595 at 4033.348 kb on + strand, within ABI39_RS15595 at 4033.349 kb on - strand, within ABI39_RS15595 at 4033.397 kb on - strand, within ABI39_RS15595 at 4033.397 kb on - strand, within ABI39_RS15595 at 4033.451 kb on + strand, within ABI39_RS15595 at 4033.467 kb on - strand, within ABI39_RS15595 at 4033.566 kb on + strand, within ABI39_RS15595 at 4033.579 kb on - strand, within ABI39_RS15595 at 4033.691 kb on - strand, within ABI39_RS15595 at 4033.692 kb on + strand, within ABI39_RS15595 at 4033.693 kb on - strand, within ABI39_RS15595 at 4033.969 kb on + strand, within ABI39_RS15595 at 4033.970 kb on - strand, within ABI39_RS15595 at 4033.987 kb on + strand, within ABI39_RS15595
Per-strain Table
Position Strand Gene LocusTag Fraction Galactose 1-phosphate dipotassium salt (C) remove 4,031,528 - ABI39_RS15580 0.87 +0.3 4,031,532 + ABI39_RS15580 0.87 +1.0 4,031,541 + ABI39_RS15580 0.87 +0.1 4,031,542 - ABI39_RS15580 0.87 -0.1 4,031,545 - ABI39_RS15580 0.88 +0.4 4,031,614 + +0.1 4,031,615 - +0.4 4,031,615 - +0.0 4,031,637 - +0.1 4,031,686 + +0.1 4,031,738 - +0.0 4,031,745 - +0.2 4,031,873 + -0.4 4,031,881 - -0.1 4,032,017 + +0.5 4,032,230 + +0.3 4,032,258 - -0.4 4,032,258 - +0.5 4,032,387 + ABI39_RS15585 0.60 +0.2 4,032,562 - ABI39_RS15590 0.11 -0.2 4,032,608 + ABI39_RS15590 0.20 -0.4 4,032,803 + ABI39_RS15590 0.55 -0.6 4,032,808 - ABI39_RS15590 0.56 -0.5 4,032,822 - ABI39_RS15590 0.58 -1.0 4,032,847 + ABI39_RS15590 0.63 -0.2 4,032,897 + ABI39_RS15590 0.72 -1.1 4,032,898 - ABI39_RS15590 0.72 -0.2 4,032,901 + ABI39_RS15590 0.72 -1.7 4,032,928 + ABI39_RS15590 0.77 -0.9 4,032,929 - ABI39_RS15590 0.77 -0.7 4,032,929 - ABI39_RS15590 0.77 -1.5 4,033,213 - +0.7 4,033,228 + -0.5 4,033,253 - ABI39_RS15595 0.11 -0.3 4,033,320 - ABI39_RS15595 0.15 -0.4 4,033,323 + ABI39_RS15595 0.15 -0.7 4,033,332 + ABI39_RS15595 0.15 +0.2 4,033,348 + ABI39_RS15595 0.16 -1.6 4,033,349 - ABI39_RS15595 0.16 +0.3 4,033,397 - ABI39_RS15595 0.19 -0.3 4,033,397 - ABI39_RS15595 0.19 +0.4 4,033,451 + ABI39_RS15595 0.22 -0.4 4,033,467 - ABI39_RS15595 0.23 +0.4 4,033,566 + ABI39_RS15595 0.29 -0.3 4,033,579 - ABI39_RS15595 0.30 +0.5 4,033,691 - ABI39_RS15595 0.36 -0.6 4,033,692 + ABI39_RS15595 0.37 -0.2 4,033,693 - ABI39_RS15595 0.37 -0.5 4,033,969 + ABI39_RS15595 0.53 -0.3 4,033,970 - ABI39_RS15595 0.53 +0.1 4,033,987 + ABI39_RS15595 0.54 -1.5
Or see this region's nucleotide sequence