Strain Fitness in Variovorax sp. SCN45 around GFF7194

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
11,517	-		GFF7193	0.22	-1.0
11,517	-		GFF7193	0.22	-0.4
11,771	+		GFF7193	0.47	-1.1
11,771	+		GFF7193	0.47	+0.2
11,771	+		GFF7193	0.47	+0.5
11,771	+		GFF7193	0.47	+0.2
11,772	-		GFF7193	0.47	-0.6
11,772	-		GFF7193	0.47	+0.6
11,772	-		GFF7193	0.47	+0.5
11,772	-		GFF7193	0.47	-0.6
11,772	-		GFF7193	0.47	+0.6
11,781	-		GFF7193	0.47	+0.7
11,781	-		GFF7193	0.47	-1.2
11,781	-		GFF7193	0.47	-3.2
11,781	-		GFF7193	0.47	-0.5
12,122	+		GFF7193	0.80	-1.2
12,122	+		GFF7193	0.80	-1.5
12,122	+		GFF7193	0.80	-0.4
12,123	-		GFF7193	0.80	-0.6
12,182	+		GFF7193	0.86	-1.4
12,182	+		GFF7193	0.86	+0.1
12,182	+		GFF7193	0.86	+1.4
12,182	+		GFF7193	0.86	+0.3
12,183	-		GFF7193	0.86	-1.7
12,183	-		GFF7193	0.86	-0.2
12,183	-		GFF7193	0.86	-0.6
12,446	+		GFF7194	0.15	-1.2
12,446	+		GFF7194	0.15	-0.1
12,447	-		GFF7194	0.15	-1.4
12,769	+		GFF7194	0.53	+0.0
12,769	+		GFF7194	0.53	-1.3
12,770	-		GFF7194	0.53	-0.4
12,770	-		GFF7194	0.53	+0.0
12,817	+		GFF7194	0.59	+0.2
12,818	-		GFF7194	0.59	+0.9
13,024	+		GFF7194	0.83	+0.6
13,024	+		GFF7194	0.83	+0.2
13,024	+		GFF7194	0.83	+0.5
13,025	-		GFF7194	0.83	-1.4
13,025	-		GFF7194	0.83	+0.8
13,025	-		GFF7194	0.83	-0.4
13,025	-		GFF7194	0.83	+1.4
13,532	-		GFF7195	0.37	-1.3
13,923	+		GFF7195	0.75	-1.1