Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2357 and GFF2358 are separated by 1 nucleotides GFF2358 and GFF2359 are separated by 31 nucleotides
GFF2357 - DNA repair protein RecN, at 408,344 to 410,026
GFF2357
GFF2358 - NAD kinase (EC 2.7.1.23), at 410,028 to 410,939
GFF2358
GFF2359 - Heat-inducible transcription repressor HrcA, at 410,971 to 411,978
GFF2359
Position (kb) 410
411 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 409.095 kb on + strand, within GFF2357 at 409.095 kb on + strand, within GFF2357 at 409.096 kb on - strand, within GFF2357 at 409.584 kb on + strand, within GFF2357 at 409.584 kb on + strand, within GFF2357 at 410.939 kb on + strand at 410.939 kb on + strand at 410.939 kb on + strand at 410.939 kb on + strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.940 kb on - strand at 410.951 kb on + strand at 410.952 kb on - strand at 410.952 kb on - strand at 410.952 kb on - strand at 410.959 kb on + strand at 410.959 kb on + strand at 410.959 kb on + strand at 410.960 kb on - strand at 410.960 kb on - strand at 411.019 kb on + strand at 411.019 kb on + strand at 411.019 kb on + strand at 411.019 kb on + strand at 411.020 kb on - strand at 411.020 kb on - strand at 411.020 kb on - strand at 411.162 kb on + strand, within GFF2359 at 411.162 kb on + strand, within GFF2359 at 411.162 kb on + strand, within GFF2359 at 411.163 kb on - strand, within GFF2359 at 411.163 kb on - strand, within GFF2359 at 411.163 kb on - strand, within GFF2359 at 411.163 kb on - strand, within GFF2359 at 411.452 kb on - strand, within GFF2359 at 411.452 kb on - strand, within GFF2359 at 411.484 kb on + strand, within GFF2359 at 411.484 kb on + strand, within GFF2359 at 411.484 kb on + strand, within GFF2359 at 411.484 kb on + strand, within GFF2359 at 411.484 kb on + strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.485 kb on - strand, within GFF2359 at 411.499 kb on + strand, within GFF2359 at 411.500 kb on - strand, within GFF2359 at 411.500 kb on - strand, within GFF2359 at 411.500 kb on - strand, within GFF2359 at 411.500 kb on - strand, within GFF2359 at 411.847 kb on + strand, within GFF2359 at 411.847 kb on + strand, within GFF2359 at 411.847 kb on + strand, within GFF2359 at 411.847 kb on + strand, within GFF2359 at 411.847 kb on + strand, within GFF2359 at 411.848 kb on - strand, within GFF2359 at 411.848 kb on - strand, within GFF2359 at 411.848 kb on - strand, within GFF2359 at 411.848 kb on - strand, within GFF2359 at 411.908 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 409,095 + GFF2357 0.45 -0.5 409,095 + GFF2357 0.45 +1.3 409,096 - GFF2357 0.45 -1.0 409,584 + GFF2357 0.74 +0.3 409,584 + GFF2357 0.74 -0.9 410,939 + +1.0 410,939 + -0.7 410,939 + -1.0 410,939 + -0.2 410,940 - -0.6 410,940 - -0.5 410,940 - +0.5 410,940 - -0.0 410,940 - -0.0 410,940 - +0.2 410,940 - -0.0 410,940 - +0.3 410,951 + -0.4 410,952 - -0.5 410,952 - -0.6 410,952 - -0.6 410,959 + +0.1 410,959 + +0.2 410,959 + +0.1 410,960 - +0.2 410,960 - +0.4 411,019 + -0.9 411,019 + +0.0 411,019 + -0.2 411,019 + -1.0 411,020 - -1.0 411,020 - -0.7 411,020 - -0.5 411,162 + GFF2359 0.19 -0.7 411,162 + GFF2359 0.19 -1.0 411,162 + GFF2359 0.19 -1.4 411,163 - GFF2359 0.19 -1.0 411,163 - GFF2359 0.19 -0.2 411,163 - GFF2359 0.19 +0.3 411,163 - GFF2359 0.19 +1.1 411,452 - GFF2359 0.48 +0.5 411,452 - GFF2359 0.48 +1.1 411,484 + GFF2359 0.51 +0.1 411,484 + GFF2359 0.51 -0.9 411,484 + GFF2359 0.51 -0.7 411,484 + GFF2359 0.51 +0.3 411,484 + GFF2359 0.51 -0.3 411,485 - GFF2359 0.51 -1.2 411,485 - GFF2359 0.51 -0.7 411,485 - GFF2359 0.51 -0.2 411,485 - GFF2359 0.51 +0.3 411,485 - GFF2359 0.51 -0.9 411,485 - GFF2359 0.51 +3.1 411,499 + GFF2359 0.52 -1.2 411,500 - GFF2359 0.52 -0.2 411,500 - GFF2359 0.52 -1.0 411,500 - GFF2359 0.52 -1.0 411,500 - GFF2359 0.52 -1.2 411,847 + GFF2359 0.87 -2.0 411,847 + GFF2359 0.87 -0.0 411,847 + GFF2359 0.87 -1.0 411,847 + GFF2359 0.87 -0.1 411,847 + GFF2359 0.87 +0.0 411,848 - GFF2359 0.87 -0.0 411,848 - GFF2359 0.87 -0.2 411,848 - GFF2359 0.87 -1.2 411,848 - GFF2359 0.87 -0.4 411,908 - +0.6
Or see this region's nucleotide sequence