Strain Fitness in Variovorax sp. SCN45 around GFF1665

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
308,437	+		GFF1664	0.33	+0.9
308,437	+		GFF1664	0.33	-1.0
308,437	+		GFF1664	0.33	-0.3
308,438	-		GFF1664	0.33	+0.0
308,438	-		GFF1664	0.33	+0.3
308,438	-		GFF1664	0.33	-0.1
308,438	-		GFF1664	0.33	-0.3
309,065	+		GFF1664	0.77	-0.3
309,065	+		GFF1664	0.77	+0.5
309,066	-		GFF1664	0.77	-0.4
309,637	+		GFF1665	0.42	+1.0
309,907	+		GFF1665	0.86	+0.0
309,907	+		GFF1665	0.86	+0.6
309,907	+		GFF1665	0.86	+0.2
310,318	-		GFF1666	0.16	-0.5
310,707	+		GFF1666	0.35	-0.1
310,707	+		GFF1666	0.35	-0.4
310,707	+		GFF1666	0.35	+0.9
310,707	+		GFF1666	0.35	+0.6
310,708	-		GFF1666	0.35	+0.0
310,708	-		GFF1666	0.35	+0.5
310,708	-		GFF1666	0.35	+0.6