Experiment: (+)-Arabinogalactan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS01910 and ABI39_RS01915 are separated by 49 nucleotides
ABI39_RS01910: ABI39_RS01910 - [FeFe] hydrogenase H-cluster radical SAM maturase HydG, at 561,190 to 562,608
_RS01910
ABI39_RS01915: ABI39_RS01915 - [FeFe] hydrogenase H-cluster maturation GTPase HydF, at 562,658 to 563,848
_RS01915
Position (kb) 562
563
564 Strain fitness (log2 ratio) -1
0
1
2 at 561.673 kb on - strand, within ABI39_RS01910 at 561.742 kb on + strand, within ABI39_RS01910 at 561.796 kb on + strand, within ABI39_RS01910 at 561.847 kb on + strand, within ABI39_RS01910 at 561.950 kb on + strand, within ABI39_RS01910 at 561.995 kb on + strand, within ABI39_RS01910 at 562.082 kb on + strand, within ABI39_RS01910 at 562.126 kb on - strand, within ABI39_RS01910 at 562.126 kb on - strand, within ABI39_RS01910 at 562.387 kb on - strand, within ABI39_RS01910 at 562.416 kb on + strand, within ABI39_RS01910 at 562.482 kb on + strand at 562.607 kb on - strand at 563.056 kb on - strand, within ABI39_RS01915 at 563.142 kb on + strand, within ABI39_RS01915 at 563.224 kb on - strand, within ABI39_RS01915 at 563.248 kb on + strand, within ABI39_RS01915 at 563.250 kb on + strand, within ABI39_RS01915 at 563.480 kb on + strand, within ABI39_RS01915 at 563.491 kb on + strand, within ABI39_RS01915 at 563.491 kb on + strand, within ABI39_RS01915 at 563.494 kb on - strand, within ABI39_RS01915 at 563.505 kb on + strand, within ABI39_RS01915 at 563.652 kb on + strand, within ABI39_RS01915 at 563.703 kb on + strand, within ABI39_RS01915 at 563.741 kb on + strand at 563.742 kb on - strand at 563.914 kb on - strand at 563.946 kb on + strand at 563.947 kb on - strand at 564.136 kb on + strand at 564.137 kb on - strand at 564.214 kb on + strand at 564.245 kb on + strand at 564.245 kb on + strand at 564.388 kb on - strand at 564.475 kb on + strand at 564.584 kb on + strand at 564.692 kb on - strand at 564.781 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction (+)-Arabinogalactan (C) remove 561,673 - ABI39_RS01910 0.34 +1.2 561,742 + ABI39_RS01910 0.39 +0.4 561,796 + ABI39_RS01910 0.43 +0.3 561,847 + ABI39_RS01910 0.46 -0.1 561,950 + ABI39_RS01910 0.54 +0.3 561,995 + ABI39_RS01910 0.57 -0.3 562,082 + ABI39_RS01910 0.63 +1.0 562,126 - ABI39_RS01910 0.66 +0.8 562,126 - ABI39_RS01910 0.66 +1.0 562,387 - ABI39_RS01910 0.84 -0.0 562,416 + ABI39_RS01910 0.86 -0.0 562,482 + +0.3 562,607 - +0.4 563,056 - ABI39_RS01915 0.33 +1.4 563,142 + ABI39_RS01915 0.41 +0.5 563,224 - ABI39_RS01915 0.48 +0.4 563,248 + ABI39_RS01915 0.50 +0.1 563,250 + ABI39_RS01915 0.50 +1.1 563,480 + ABI39_RS01915 0.69 +0.8 563,491 + ABI39_RS01915 0.70 +0.3 563,491 + ABI39_RS01915 0.70 +1.0 563,494 - ABI39_RS01915 0.70 +0.4 563,505 + ABI39_RS01915 0.71 +0.3 563,652 + ABI39_RS01915 0.83 +0.8 563,703 + ABI39_RS01915 0.88 +0.5 563,741 + +1.0 563,742 - +0.4 563,914 - +0.1 563,946 + +2.0 563,947 - -0.2 564,136 + -0.2 564,137 - +0.1 564,214 + -0.4 564,245 + +0.5 564,245 + -0.6 564,388 - +0.2 564,475 + -0.2 564,584 + +0.2 564,692 - -0.6 564,781 - -0.2
Or see this region's nucleotide sequence