Strain Fitness in Variovorax sp. SCN45 around GFF92

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
106,955	+				-0.1
106,955	+				-0.9
106,957	+				-0.3
106,957	+				+0.4
107,621	+				-1.2
107,622	-				-0.4
107,684	+		GFF92	0.17	-0.6
107,684	+		GFF92	0.17	-0.4
107,684	+		GFF92	0.17	+0.1
107,684	+		GFF92	0.17	-0.7
107,685	-		GFF92	0.17	-0.3
107,685	-		GFF92	0.17	-0.4
108,013	+				+0.2
108,014	-				-0.7
108,014	-				-0.9
108,497	+				-0.9
108,498	-				+0.9
108,498	-				+0.6
108,498	-				+0.1
108,498	-				+0.8
108,558	-				+1.3
108,633	+				-0.7
108,633	+				-2.2
108,633	+				-2.4
108,634	-				-0.2