Strain Fitness in Variovorax sp. SCN45 around GFF843

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
151,514	-		GFF842	0.85	+0.4
151,548	+		GFF842	0.86	+0.3
151,549	-		GFF842	0.86	-0.2
151,549	-		GFF842	0.86	+1.6
151,590	-		GFF842	0.88	-1.1
151,823	-				-0.3
151,823	-				-0.4
151,823	-				-0.7
152,072	-				-1.1
152,072	-				+0.6
152,072	-				+0.1
152,140	+				+0.6
152,140	+				-0.0
152,140	+				-0.2
152,140	+				+0.1
152,141	-				-0.3
152,141	-				+1.2
152,190	+				+0.7
152,382	+		GFF843	0.24	-1.9
152,382	+		GFF843	0.24	-0.6
152,383	-		GFF843	0.24	-0.1
152,383	-		GFF843	0.24	-0.4
152,581	+		GFF843	0.42	-0.1
152,581	+		GFF843	0.42	+1.6
152,843	+		GFF843	0.66	+0.1
152,845	-		GFF843	0.66	-0.8
152,845	-		GFF843	0.66	-0.2
152,845	-		GFF843	0.66	+0.6
152,845	-		GFF843	0.66	-0.8
152,845	-		GFF843	0.66	-0.2
153,075	+		GFF843	0.87	-1.0
153,112	-				-0.6
153,514	+		GFF844	0.20	-1.5
153,712	+		GFF844	0.34	-1.1
153,713	-		GFF844	0.34	-0.9
153,713	-		GFF844	0.34	+0.0
153,713	-		GFF844	0.34	-1.1
153,788	-		GFF844	0.39	+0.1
154,202	-		GFF844	0.68	-1.6
154,202	-		GFF844	0.68	-0.9
154,202	-		GFF844	0.68	-0.8
154,202	-		GFF844	0.68	-1.0