Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7318 and GFF7319 are separated by 184 nucleotides GFF7319 and GFF7320 are separated by 85 nucleotides
GFF7318 - RND efflux system, membrane fusion protein, at 12,791 to 14,047
GFF7318
GFF7319 - hypothetical protein, at 14,232 to 14,690
GFF7319
GFF7320 - tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3), at 14,776 to 16,122
GFF7320
Position (kb) 14
15 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 13.440 kb on + strand, within GFF7318 at 13.440 kb on + strand, within GFF7318 at 13.441 kb on - strand, within GFF7318 at 13.441 kb on - strand, within GFF7318 at 13.441 kb on - strand, within GFF7318 at 13.491 kb on + strand, within GFF7318 at 13.491 kb on + strand, within GFF7318 at 13.492 kb on - strand, within GFF7318 at 13.632 kb on + strand, within GFF7318 at 13.632 kb on + strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 13.633 kb on - strand, within GFF7318 at 14.004 kb on - strand at 14.080 kb on + strand at 14.081 kb on - strand at 14.130 kb on + strand at 14.130 kb on + strand at 14.130 kb on + strand at 14.130 kb on + strand at 14.131 kb on - strand at 14.198 kb on - strand at 14.225 kb on - strand at 14.264 kb on + strand at 14.265 kb on - strand at 14.538 kb on + strand, within GFF7319 at 14.538 kb on + strand, within GFF7319 at 14.538 kb on + strand, within GFF7319 at 14.538 kb on + strand, within GFF7319 at 14.538 kb on + strand, within GFF7319 at 14.538 kb on + strand, within GFF7319 at 14.539 kb on - strand, within GFF7319 at 14.539 kb on - strand, within GFF7319 at 14.539 kb on - strand, within GFF7319 at 14.550 kb on + strand, within GFF7319 at 14.550 kb on + strand, within GFF7319 at 14.550 kb on + strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.551 kb on - strand, within GFF7319 at 14.688 kb on + strand at 14.688 kb on + strand at 14.688 kb on + strand at 14.688 kb on + strand at 14.688 kb on + strand at 14.688 kb on + strand at 14.688 kb on + strand at 14.689 kb on - strand at 14.689 kb on - strand at 14.786 kb on + strand at 14.786 kb on + strand at 14.787 kb on - strand at 14.787 kb on - strand at 14.787 kb on - strand at 14.787 kb on - strand at 14.821 kb on + strand at 14.821 kb on + strand at 14.866 kb on + strand at 14.866 kb on + strand at 14.866 kb on + strand at 14.866 kb on + strand at 14.867 kb on - strand at 14.867 kb on - strand at 15.058 kb on + strand, within GFF7320 at 15.058 kb on + strand, within GFF7320 at 15.058 kb on + strand, within GFF7320 at 15.058 kb on + strand, within GFF7320 at 15.059 kb on - strand, within GFF7320 at 15.059 kb on - strand, within GFF7320 at 15.059 kb on - strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.244 kb on + strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.245 kb on - strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.253 kb on + strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.254 kb on - strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.268 kb on + strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.269 kb on - strand, within GFF7320 at 15.383 kb on - strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.439 kb on + strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.440 kb on - strand, within GFF7320 at 15.475 kb on + strand, within GFF7320 at 15.475 kb on + strand, within GFF7320 at 15.476 kb on - strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.523 kb on + strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.524 kb on - strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.610 kb on + strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.611 kb on - strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.625 kb on + strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320 at 15.626 kb on - strand, within GFF7320
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 13,440 + GFF7318 0.52 -1.2 13,440 + GFF7318 0.52 -0.6 13,441 - GFF7318 0.52 -1.1 13,441 - GFF7318 0.52 +0.6 13,441 - GFF7318 0.52 +0.2 13,491 + GFF7318 0.56 +2.0 13,491 + GFF7318 0.56 -1.6 13,492 - GFF7318 0.56 +0.3 13,632 + GFF7318 0.67 -0.4 13,632 + GFF7318 0.67 -0.1 13,633 - GFF7318 0.67 +0.2 13,633 - GFF7318 0.67 -0.5 13,633 - GFF7318 0.67 +0.0 13,633 - GFF7318 0.67 -1.3 13,633 - GFF7318 0.67 -0.6 13,633 - GFF7318 0.67 -1.0 13,633 - GFF7318 0.67 -0.3 13,633 - GFF7318 0.67 +0.1 13,633 - GFF7318 0.67 +0.8 13,633 - GFF7318 0.67 +0.9 14,004 - -0.4 14,080 + +1.9 14,081 - +2.4 14,130 + -1.4 14,130 + +0.6 14,130 + -1.5 14,130 + -1.8 14,131 - +1.0 14,198 - -0.2 14,225 - -1.1 14,264 + -0.1 14,265 - +0.3 14,538 + GFF7319 0.67 -0.7 14,538 + GFF7319 0.67 +0.3 14,538 + GFF7319 0.67 -0.1 14,538 + GFF7319 0.67 +0.3 14,538 + GFF7319 0.67 -0.8 14,538 + GFF7319 0.67 +2.9 14,539 - GFF7319 0.67 -0.5 14,539 - GFF7319 0.67 -0.2 14,539 - GFF7319 0.67 +0.4 14,550 + GFF7319 0.69 -0.6 14,550 + GFF7319 0.69 -0.6 14,550 + GFF7319 0.69 +0.3 14,551 - GFF7319 0.69 -0.0 14,551 - GFF7319 0.69 -0.1 14,551 - GFF7319 0.69 +0.5 14,551 - GFF7319 0.69 -0.0 14,551 - GFF7319 0.69 -0.4 14,551 - GFF7319 0.69 +0.4 14,551 - GFF7319 0.69 -0.3 14,688 + -0.0 14,688 + -1.1 14,688 + +0.4 14,688 + +0.6 14,688 + +0.7 14,688 + -0.3 14,688 + +0.2 14,689 - -0.8 14,689 - +0.2 14,786 + -0.0 14,786 + +1.2 14,787 - +0.3 14,787 - -1.2 14,787 - -0.2 14,787 - -0.3 14,821 + -2.5 14,821 + -0.4 14,866 + +0.3 14,866 + -0.5 14,866 + -0.6 14,866 + -0.7 14,867 - -0.6 14,867 - +0.3 15,058 + GFF7320 0.21 -0.1 15,058 + GFF7320 0.21 +0.9 15,058 + GFF7320 0.21 -0.6 15,058 + GFF7320 0.21 +0.1 15,059 - GFF7320 0.21 -0.7 15,059 - GFF7320 0.21 -1.1 15,059 - GFF7320 0.21 -1.2 15,244 + GFF7320 0.35 -0.5 15,244 + GFF7320 0.35 +0.5 15,244 + GFF7320 0.35 -2.2 15,244 + GFF7320 0.35 -0.9 15,244 + GFF7320 0.35 -0.3 15,244 + GFF7320 0.35 +0.4 15,244 + GFF7320 0.35 -0.2 15,245 - GFF7320 0.35 -1.5 15,245 - GFF7320 0.35 -0.3 15,245 - GFF7320 0.35 +1.1 15,245 - GFF7320 0.35 -0.4 15,245 - GFF7320 0.35 -0.4 15,245 - GFF7320 0.35 +1.0 15,245 - GFF7320 0.35 -2.4 15,245 - GFF7320 0.35 +0.1 15,253 + GFF7320 0.35 +0.1 15,253 + GFF7320 0.35 -0.5 15,253 + GFF7320 0.35 +0.0 15,253 + GFF7320 0.35 -0.7 15,253 + GFF7320 0.35 -1.5 15,253 + GFF7320 0.35 +0.0 15,253 + GFF7320 0.35 +0.7 15,253 + GFF7320 0.35 +0.3 15,254 - GFF7320 0.35 +1.2 15,254 - GFF7320 0.35 -0.1 15,254 - GFF7320 0.35 +0.2 15,254 - GFF7320 0.35 +0.1 15,254 - GFF7320 0.35 -0.0 15,254 - GFF7320 0.35 -0.3 15,268 + GFF7320 0.37 +0.8 15,268 + GFF7320 0.37 +2.7 15,268 + GFF7320 0.37 -0.9 15,269 - GFF7320 0.37 -0.7 15,269 - GFF7320 0.37 -0.3 15,269 - GFF7320 0.37 -0.7 15,383 - GFF7320 0.45 +0.0 15,439 + GFF7320 0.49 -0.8 15,439 + GFF7320 0.49 -0.2 15,439 + GFF7320 0.49 -1.3 15,439 + GFF7320 0.49 -0.1 15,439 + GFF7320 0.49 -0.4 15,439 + GFF7320 0.49 +0.4 15,439 + GFF7320 0.49 -0.1 15,439 + GFF7320 0.49 +0.2 15,439 + GFF7320 0.49 -0.1 15,440 - GFF7320 0.49 -1.7 15,440 - GFF7320 0.49 -0.2 15,440 - GFF7320 0.49 -0.5 15,440 - GFF7320 0.49 -1.7 15,440 - GFF7320 0.49 +0.4 15,475 + GFF7320 0.52 +0.9 15,475 + GFF7320 0.52 +0.2 15,476 - GFF7320 0.52 +0.6 15,523 + GFF7320 0.55 +1.4 15,523 + GFF7320 0.55 -0.4 15,523 + GFF7320 0.55 +0.3 15,523 + GFF7320 0.55 -0.4 15,523 + GFF7320 0.55 -0.4 15,523 + GFF7320 0.55 +0.1 15,524 - GFF7320 0.56 -2.5 15,524 - GFF7320 0.56 +0.9 15,524 - GFF7320 0.56 +0.1 15,524 - GFF7320 0.56 -0.9 15,610 + GFF7320 0.62 -1.8 15,610 + GFF7320 0.62 -0.4 15,610 + GFF7320 0.62 -0.1 15,611 - GFF7320 0.62 -0.3 15,611 - GFF7320 0.62 +0.3 15,611 - GFF7320 0.62 +1.9 15,611 - GFF7320 0.62 +0.6 15,625 + GFF7320 0.63 +1.9 15,625 + GFF7320 0.63 +0.5 15,625 + GFF7320 0.63 +0.4 15,625 + GFF7320 0.63 -0.1 15,625 + GFF7320 0.63 -0.6 15,625 + GFF7320 0.63 +1.2 15,625 + GFF7320 0.63 +0.0 15,625 + GFF7320 0.63 -0.7 15,626 - GFF7320 0.63 -0.4 15,626 - GFF7320 0.63 -0.2 15,626 - GFF7320 0.63 -0.5 15,626 - GFF7320 0.63 +0.3 15,626 - GFF7320 0.63 -0.4 15,626 - GFF7320 0.63 +0.9 15,626 - GFF7320 0.63 -0.3
Or see this region's nucleotide sequence