Strain Fitness in Variovorax sp. SCN45 around GFF7263

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
9,590	+		GFF7262	0.56	-1.4
9,590	+		GFF7262	0.56	+0.5
9,635	+		GFF7262	0.71	-0.9
9,683	+		GFF7262	0.88	-1.6
9,683	+		GFF7262	0.88	+0.1
9,707	+				+0.0
9,761	+				-1.9
9,860	+		GFF7263	0.12	-0.6
10,047	-		GFF7263	0.29	+0.4
10,164	-		GFF7263	0.40	-1.8
10,226	-		GFF7263	0.46	-0.4
10,568	+		GFF7263	0.77	-0.6
10,854	+				-0.8
10,985	+				-0.7
10,985	+				+0.1
11,031	+				+0.3
11,031	+				-0.4
11,063	-				-0.3
11,074	+				-0.6
11,265	-				-0.9
11,340	+				-0.5
11,340	+				+0.2
11,340	+				-1.0
11,453	+		GFF7264	0.15	-0.6
11,794	-		GFF7264	0.55	-0.7
11,794	-		GFF7264	0.55	-0.7