Strain Fitness in Variovorax sp. SCN45 around GFF72

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
88,287	+				-0.5
88,287	+				+1.4
88,288	-				-0.4
88,288	-				-0.4
88,288	-				+0.2
88,446	+				-0.6
88,526	-		GFF71	0.14	-0.7
88,526	-		GFF71	0.14	-0.0
88,795	+		GFF71	0.48	-0.3
88,795	+		GFF71	0.48	-2.7
88,796	-		GFF71	0.48	+1.4
89,232	+				-0.5
89,449	+		GFF72	0.18	-0.8
89,449	+		GFF72	0.18	-0.0
89,449	+		GFF72	0.18	+0.7
89,449	+		GFF72	0.18	-0.6
89,449	+		GFF72	0.18	-0.6
89,449	+		GFF72	0.18	+0.8
89,450	-		GFF72	0.18	-0.5
89,450	-		GFF72	0.18	-0.0
89,450	-		GFF72	0.18	+0.2
89,671	+		GFF72	0.38	+1.0
89,671	+		GFF72	0.38	-1.1
89,671	+		GFF72	0.38	+0.3
89,671	+		GFF72	0.38	+0.2
89,671	+		GFF72	0.38	-0.6
89,672	-		GFF72	0.38	+0.3
89,672	-		GFF72	0.38	+0.6
89,672	-		GFF72	0.38	+0.1
90,134	-		GFF72	0.78	+0.8
90,495	+		GFF73	0.17	-0.7
90,496	-		GFF73	0.18	+0.6
90,496	-		GFF73	0.18	-0.2
90,534	+		GFF73	0.23	-0.6
90,535	-		GFF73	0.23	+0.4
90,621	+		GFF73	0.37	-1.4
90,621	+		GFF73	0.37	+0.8
90,873	+		GFF73	0.75	-0.2
90,873	+		GFF73	0.75	-1.2
90,873	+		GFF73	0.75	-0.8
90,873	+		GFF73	0.75	-0.2
90,873	+		GFF73	0.75	-0.2
90,874	-		GFF73	0.75	-1.4
90,874	-		GFF73	0.75	+0.1
90,874	-		GFF73	0.75	+1.3
90,874	-		GFF73	0.75	+0.0
90,889	-		GFF73	0.77	-0.9
90,903	+		GFF73	0.79	-0.6
91,052	+				+1.2
91,052	+				-0.2
91,052	+				-1.9
91,053	-				-0.6
91,053	-				+1.4
91,099	+				-1.7