Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7154 and GFF7155 overlap by 4 nucleotides GFF7155 and GFF7156 are separated by 123 nucleotides GFF7156 and GFF7157 are separated by 16 nucleotides
GFF7154 - Toxin HigB / Protein kinase domain of HipA, at 18,782 to 20,107
GFF7154
GFF7155 - hypothetical protein, at 20,104 to 20,565
GFF7155
GFF7156 - hypothetical protein, at 20,689 to 21,693
GFF7156
GFF7157 - Peptidase M20D, amidohydrolase, at 21,710 to 22,912
GFF7157
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 19.926 kb on + strand, within GFF7154 at 19.926 kb on + strand, within GFF7154 at 19.926 kb on + strand, within GFF7154 at 19.926 kb on + strand, within GFF7154 at 19.926 kb on + strand, within GFF7154 at 19.926 kb on + strand, within GFF7154 at 19.927 kb on - strand, within GFF7154 at 19.927 kb on - strand, within GFF7154 at 20.025 kb on + strand at 20.026 kb on - strand at 20.026 kb on - strand at 20.026 kb on - strand at 20.066 kb on + strand at 20.066 kb on + strand at 20.066 kb on + strand at 20.066 kb on + strand at 20.067 kb on - strand at 20.067 kb on - strand at 20.067 kb on - strand at 20.924 kb on + strand, within GFF7156 at 20.924 kb on + strand, within GFF7156 at 20.924 kb on + strand, within GFF7156 at 20.924 kb on + strand, within GFF7156 at 20.924 kb on + strand, within GFF7156 at 20.925 kb on - strand, within GFF7156 at 20.925 kb on - strand, within GFF7156 at 20.925 kb on - strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.197 kb on + strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.198 kb on - strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.203 kb on + strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.204 kb on - strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.284 kb on + strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.285 kb on - strand, within GFF7156 at 21.335 kb on + strand, within GFF7156 at 21.335 kb on + strand, within GFF7156 at 21.335 kb on + strand, within GFF7156 at 21.335 kb on + strand, within GFF7156 at 21.335 kb on + strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.336 kb on - strand, within GFF7156 at 21.350 kb on + strand, within GFF7156 at 21.350 kb on + strand, within GFF7156 at 21.350 kb on + strand, within GFF7156 at 21.350 kb on + strand, within GFF7156 at 21.351 kb on - strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.586 kb on + strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.587 kb on - strand, within GFF7156 at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.753 kb on + strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.754 kb on - strand at 21.873 kb on + strand, within GFF7157 at 21.873 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.038 kb on + strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.039 kb on - strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.350 kb on + strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157 at 22.351 kb on - strand, within GFF7157
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 19,926 + GFF7154 0.86 -0.8 19,926 + GFF7154 0.86 -0.2 19,926 + GFF7154 0.86 -2.0 19,926 + GFF7154 0.86 -0.8 19,926 + GFF7154 0.86 -0.1 19,926 + GFF7154 0.86 -1.0 19,927 - GFF7154 0.86 +0.2 19,927 - GFF7154 0.86 -0.1 20,025 + -0.0 20,026 - -0.2 20,026 - +0.5 20,026 - -0.9 20,066 + -0.4 20,066 + -0.1 20,066 + -0.4 20,066 + -0.8 20,067 - +0.5 20,067 - +1.1 20,067 - -1.9 20,924 + GFF7156 0.23 -0.5 20,924 + GFF7156 0.23 -0.6 20,924 + GFF7156 0.23 -0.5 20,924 + GFF7156 0.23 -0.1 20,924 + GFF7156 0.23 +1.6 20,925 - GFF7156 0.23 -0.7 20,925 - GFF7156 0.23 -0.5 20,925 - GFF7156 0.23 -2.0 21,197 + GFF7156 0.51 -0.3 21,197 + GFF7156 0.51 +0.5 21,197 + GFF7156 0.51 +0.5 21,197 + GFF7156 0.51 +0.0 21,197 + GFF7156 0.51 -0.6 21,197 + GFF7156 0.51 +0.7 21,197 + GFF7156 0.51 +0.5 21,197 + GFF7156 0.51 -0.2 21,197 + GFF7156 0.51 -0.5 21,197 + GFF7156 0.51 -1.1 21,197 + GFF7156 0.51 +0.1 21,197 + GFF7156 0.51 +1.4 21,197 + GFF7156 0.51 +0.2 21,197 + GFF7156 0.51 +0.1 21,198 - GFF7156 0.51 -1.5 21,198 - GFF7156 0.51 -0.3 21,198 - GFF7156 0.51 -0.8 21,198 - GFF7156 0.51 +0.6 21,198 - GFF7156 0.51 +1.6 21,198 - GFF7156 0.51 +1.6 21,198 - GFF7156 0.51 +0.2 21,198 - GFF7156 0.51 +0.5 21,198 - GFF7156 0.51 -0.4 21,198 - GFF7156 0.51 +0.1 21,198 - GFF7156 0.51 -1.8 21,198 - GFF7156 0.51 -0.3 21,198 - GFF7156 0.51 +0.2 21,198 - GFF7156 0.51 +2.5 21,198 - GFF7156 0.51 -1.2 21,198 - GFF7156 0.51 -0.4 21,198 - GFF7156 0.51 +0.7 21,198 - GFF7156 0.51 -0.4 21,198 - GFF7156 0.51 -0.2 21,203 + GFF7156 0.51 -2.0 21,203 + GFF7156 0.51 -0.1 21,203 + GFF7156 0.51 +0.1 21,203 + GFF7156 0.51 -0.5 21,203 + GFF7156 0.51 +0.7 21,203 + GFF7156 0.51 -1.1 21,203 + GFF7156 0.51 -0.2 21,203 + GFF7156 0.51 +1.0 21,203 + GFF7156 0.51 -0.4 21,203 + GFF7156 0.51 -0.6 21,203 + GFF7156 0.51 -0.3 21,204 - GFF7156 0.51 +0.1 21,204 - GFF7156 0.51 +1.6 21,204 - GFF7156 0.51 -0.2 21,204 - GFF7156 0.51 -0.2 21,204 - GFF7156 0.51 +0.9 21,204 - GFF7156 0.51 +0.2 21,204 - GFF7156 0.51 +0.0 21,204 - GFF7156 0.51 -0.3 21,204 - GFF7156 0.51 -1.0 21,204 - GFF7156 0.51 +0.6 21,204 - GFF7156 0.51 -0.4 21,204 - GFF7156 0.51 -0.8 21,204 - GFF7156 0.51 -0.1 21,204 - GFF7156 0.51 -0.7 21,204 - GFF7156 0.51 +0.6 21,204 - GFF7156 0.51 -0.8 21,204 - GFF7156 0.51 +0.6 21,204 - GFF7156 0.51 -0.3 21,204 - GFF7156 0.51 -0.4 21,204 - GFF7156 0.51 +1.1 21,204 - GFF7156 0.51 -1.4 21,284 + GFF7156 0.59 +0.2 21,284 + GFF7156 0.59 -1.6 21,284 + GFF7156 0.59 +0.1 21,284 + GFF7156 0.59 -0.1 21,284 + GFF7156 0.59 +0.3 21,284 + GFF7156 0.59 -0.7 21,284 + GFF7156 0.59 -0.3 21,284 + GFF7156 0.59 -1.3 21,284 + GFF7156 0.59 +0.3 21,284 + GFF7156 0.59 +0.1 21,284 + GFF7156 0.59 -0.2 21,285 - GFF7156 0.59 -0.1 21,285 - GFF7156 0.59 -1.1 21,285 - GFF7156 0.59 +0.0 21,285 - GFF7156 0.59 +1.1 21,285 - GFF7156 0.59 +1.0 21,285 - GFF7156 0.59 +0.5 21,285 - GFF7156 0.59 -0.4 21,285 - GFF7156 0.59 +1.5 21,285 - GFF7156 0.59 -0.2 21,285 - GFF7156 0.59 +0.4 21,285 - GFF7156 0.59 -0.4 21,285 - GFF7156 0.59 -0.8 21,285 - GFF7156 0.59 +0.2 21,285 - GFF7156 0.59 -0.8 21,285 - GFF7156 0.59 +0.0 21,335 + GFF7156 0.64 -0.2 21,335 + GFF7156 0.64 +0.5 21,335 + GFF7156 0.64 -1.5 21,335 + GFF7156 0.64 -0.6 21,335 + GFF7156 0.64 -0.6 21,336 - GFF7156 0.64 +0.9 21,336 - GFF7156 0.64 +0.1 21,336 - GFF7156 0.64 +0.4 21,336 - GFF7156 0.64 +0.1 21,336 - GFF7156 0.64 -0.7 21,336 - GFF7156 0.64 +1.2 21,336 - GFF7156 0.64 -0.3 21,336 - GFF7156 0.64 -1.3 21,336 - GFF7156 0.64 -1.3 21,336 - GFF7156 0.64 -0.1 21,336 - GFF7156 0.64 +0.2 21,336 - GFF7156 0.64 -0.1 21,336 - GFF7156 0.64 +0.1 21,350 + GFF7156 0.66 +1.1 21,350 + GFF7156 0.66 +0.9 21,350 + GFF7156 0.66 -1.4 21,350 + GFF7156 0.66 -1.5 21,351 - GFF7156 0.66 +1.0 21,586 + GFF7156 0.89 +0.4 21,586 + GFF7156 0.89 -0.8 21,586 + GFF7156 0.89 -0.1 21,586 + GFF7156 0.89 -1.0 21,586 + GFF7156 0.89 +0.0 21,586 + GFF7156 0.89 -0.8 21,586 + GFF7156 0.89 +0.1 21,586 + GFF7156 0.89 +0.2 21,587 - GFF7156 0.89 -1.3 21,587 - GFF7156 0.89 -1.2 21,587 - GFF7156 0.89 -0.1 21,587 - GFF7156 0.89 +3.0 21,587 - GFF7156 0.89 +0.5 21,587 - GFF7156 0.89 -0.6 21,587 - GFF7156 0.89 -0.5 21,587 - GFF7156 0.89 -0.3 21,587 - GFF7156 0.89 +1.0 21,587 - GFF7156 0.89 -0.6 21,753 + -0.3 21,753 + -0.3 21,753 + -0.9 21,753 + -0.4 21,753 + +0.9 21,753 + +0.1 21,753 + -0.4 21,753 + -1.5 21,753 + +0.5 21,753 + -1.7 21,753 + -1.5 21,753 + -1.0 21,753 + -0.9 21,754 - +0.6 21,754 - +0.2 21,754 - -0.5 21,754 - +0.5 21,754 - +0.2 21,754 - -1.5 21,754 - +0.4 21,754 - -0.7 21,873 + GFF7157 0.14 +0.3 21,873 + GFF7157 0.14 +0.4 22,038 + GFF7157 0.27 +0.9 22,038 + GFF7157 0.27 +0.3 22,038 + GFF7157 0.27 +0.0 22,038 + GFF7157 0.27 +0.2 22,038 + GFF7157 0.27 -0.1 22,038 + GFF7157 0.27 -0.1 22,038 + GFF7157 0.27 -0.4 22,038 + GFF7157 0.27 -0.4 22,038 + GFF7157 0.27 +0.7 22,038 + GFF7157 0.27 -0.4 22,038 + GFF7157 0.27 +0.6 22,038 + GFF7157 0.27 -0.5 22,038 + GFF7157 0.27 +1.0 22,039 - GFF7157 0.27 +0.6 22,039 - GFF7157 0.27 -1.2 22,039 - GFF7157 0.27 -0.3 22,039 - GFF7157 0.27 +0.4 22,039 - GFF7157 0.27 -0.7 22,039 - GFF7157 0.27 -0.1 22,039 - GFF7157 0.27 -0.1 22,039 - GFF7157 0.27 -0.2 22,039 - GFF7157 0.27 +0.1 22,039 - GFF7157 0.27 -0.7 22,039 - GFF7157 0.27 -0.5 22,039 - GFF7157 0.27 -1.3 22,039 - GFF7157 0.27 +0.2 22,039 - GFF7157 0.27 -0.2 22,039 - GFF7157 0.27 +0.5 22,039 - GFF7157 0.27 -0.3 22,039 - GFF7157 0.27 -1.4 22,039 - GFF7157 0.27 -0.1 22,039 - GFF7157 0.27 +1.3 22,350 + GFF7157 0.53 -0.1 22,350 + GFF7157 0.53 -0.1 22,350 + GFF7157 0.53 -0.5 22,350 + GFF7157 0.53 +0.9 22,350 + GFF7157 0.53 -0.3 22,350 + GFF7157 0.53 -0.8 22,350 + GFF7157 0.53 -1.0 22,350 + GFF7157 0.53 -0.5 22,350 + GFF7157 0.53 -0.4 22,350 + GFF7157 0.53 -1.0 22,350 + GFF7157 0.53 -0.6 22,350 + GFF7157 0.53 -0.4 22,350 + GFF7157 0.53 -0.3 22,350 + GFF7157 0.53 +0.4 22,350 + GFF7157 0.53 +0.4 22,350 + GFF7157 0.53 -1.1 22,350 + GFF7157 0.53 +1.5 22,350 + GFF7157 0.53 +0.2 22,351 - GFF7157 0.53 -0.2 22,351 - GFF7157 0.53 +2.0 22,351 - GFF7157 0.53 +0.3 22,351 - GFF7157 0.53 -0.1 22,351 - GFF7157 0.53 -0.4 22,351 - GFF7157 0.53 -0.1 22,351 - GFF7157 0.53 -0.4 22,351 - GFF7157 0.53 -0.3 22,351 - GFF7157 0.53 +0.3 22,351 - GFF7157 0.53 -0.6 22,351 - GFF7157 0.53 -0.1 22,351 - GFF7157 0.53 +1.0 22,351 - GFF7157 0.53 +0.4 22,351 - GFF7157 0.53 -1.7 22,351 - GFF7157 0.53 +1.6 22,351 - GFF7157 0.53 -1.4 22,351 - GFF7157 0.53 +0.5 22,351 - GFF7157 0.53 -0.9 22,351 - GFF7157 0.53 +0.2
Or see this region's nucleotide sequence