Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7106 and GFF7107 overlap by 4 nucleotides GFF7107 and GFF7108 are separated by 101 nucleotides
GFF7106 - BUG/TctC family periplasmic protein, at 23,253 to 24,233
GFF7106
GFF7107 - 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, at 24,230 to 25,900
GFF7107
GFF7108 - Transcriptional regulator, LysR family, at 26,002 to 26,907
GFF7108
Position (kb) 24
25
26 Strain fitness (log2 ratio) -2
-1
0
1
2 at 23.283 kb on - strand at 23.283 kb on - strand at 23.283 kb on - strand at 23.317 kb on + strand at 23.317 kb on + strand at 23.317 kb on + strand at 23.317 kb on + strand at 23.317 kb on + strand at 23.317 kb on + strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.400 kb on + strand, within GFF7106 at 23.400 kb on + strand, within GFF7106 at 23.400 kb on + strand, within GFF7106 at 23.400 kb on + strand, within GFF7106 at 23.400 kb on + strand, within GFF7106 at 23.401 kb on - strand, within GFF7106 at 23.401 kb on - strand, within GFF7106 at 23.401 kb on - strand, within GFF7106 at 23.422 kb on + strand, within GFF7106 at 23.423 kb on - strand, within GFF7106 at 23.770 kb on + strand, within GFF7106 at 23.770 kb on + strand, within GFF7106 at 23.770 kb on + strand, within GFF7106 at 23.770 kb on + strand, within GFF7106 at 23.771 kb on - strand, within GFF7106 at 23.771 kb on - strand, within GFF7106 at 23.771 kb on - strand, within GFF7106 at 23.771 kb on - strand, within GFF7106 at 23.771 kb on - strand, within GFF7106 at 23.909 kb on - strand, within GFF7106 at 23.923 kb on + strand, within GFF7106 at 24.209 kb on - strand at 24.260 kb on - strand at 24.347 kb on + strand at 24.347 kb on + strand at 24.347 kb on + strand at 24.348 kb on - strand at 24.348 kb on - strand at 24.348 kb on - strand at 24.366 kb on + strand at 24.366 kb on + strand at 24.483 kb on + strand, within GFF7107 at 24.483 kb on + strand, within GFF7107 at 24.483 kb on + strand, within GFF7107 at 24.483 kb on + strand, within GFF7107 at 24.483 kb on + strand, within GFF7107 at 24.484 kb on - strand, within GFF7107 at 24.484 kb on - strand, within GFF7107 at 24.585 kb on + strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.586 kb on - strand, within GFF7107 at 24.609 kb on + strand, within GFF7107 at 24.610 kb on - strand, within GFF7107 at 24.633 kb on + strand, within GFF7107 at 24.633 kb on + strand, within GFF7107 at 24.633 kb on + strand, within GFF7107 at 24.634 kb on - strand, within GFF7107 at 24.634 kb on - strand, within GFF7107 at 24.634 kb on - strand, within GFF7107 at 24.634 kb on - strand, within GFF7107 at 24.634 kb on - strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.636 kb on + strand, within GFF7107 at 24.637 kb on - strand, within GFF7107 at 24.637 kb on - strand, within GFF7107 at 24.637 kb on - strand, within GFF7107 at 24.637 kb on - strand, within GFF7107 at 24.637 kb on - strand, within GFF7107 at 24.640 kb on - strand, within GFF7107 at 24.666 kb on + strand, within GFF7107 at 24.666 kb on + strand, within GFF7107 at 24.666 kb on + strand, within GFF7107 at 24.667 kb on - strand, within GFF7107 at 24.687 kb on + strand, within GFF7107 at 24.687 kb on + strand, within GFF7107 at 24.687 kb on + strand, within GFF7107 at 24.688 kb on - strand, within GFF7107 at 24.688 kb on - strand, within GFF7107 at 24.688 kb on - strand, within GFF7107 at 24.821 kb on - strand, within GFF7107 at 24.823 kb on + strand, within GFF7107 at 24.823 kb on + strand, within GFF7107 at 24.823 kb on + strand, within GFF7107 at 24.823 kb on + strand, within GFF7107 at 24.824 kb on - strand, within GFF7107 at 24.824 kb on - strand, within GFF7107 at 24.824 kb on - strand, within GFF7107 at 24.843 kb on + strand, within GFF7107 at 24.843 kb on + strand, within GFF7107 at 24.843 kb on + strand, within GFF7107 at 24.843 kb on + strand, within GFF7107 at 24.844 kb on - strand, within GFF7107 at 24.902 kb on + strand, within GFF7107 at 24.902 kb on + strand, within GFF7107 at 24.902 kb on + strand, within GFF7107 at 24.903 kb on - strand, within GFF7107 at 24.940 kb on - strand, within GFF7107 at 24.940 kb on - strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.183 kb on - strand, within GFF7107 at 25.183 kb on - strand, within GFF7107 at 25.292 kb on + strand, within GFF7107 at 25.292 kb on + strand, within GFF7107 at 25.293 kb on - strand, within GFF7107 at 25.293 kb on - strand, within GFF7107 at 25.368 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.594 kb on - strand, within GFF7107 at 25.651 kb on + strand, within GFF7107 at 25.675 kb on - strand, within GFF7107 at 25.808 kb on + strand at 25.808 kb on + strand at 25.808 kb on + strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.956 kb on + strand at 25.956 kb on + strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.984 kb on + strand at 25.986 kb on + strand at 25.997 kb on + strand at 26.050 kb on + strand at 26.050 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 23,283 - -0.8 23,283 - -1.2 23,283 - +0.5 23,317 + +0.4 23,317 + -0.3 23,317 + -1.1 23,317 + -1.2 23,317 + +0.4 23,317 + +0.5 23,318 - -1.0 23,318 - -0.6 23,318 - -0.3 23,318 - +1.0 23,318 - +0.2 23,318 - -0.2 23,318 - -0.0 23,318 - -0.6 23,400 + GFF7106 0.15 +0.3 23,400 + GFF7106 0.15 -0.4 23,400 + GFF7106 0.15 +0.3 23,400 + GFF7106 0.15 +0.0 23,400 + GFF7106 0.15 -0.7 23,401 - GFF7106 0.15 +0.2 23,401 - GFF7106 0.15 -0.6 23,401 - GFF7106 0.15 +0.2 23,422 + GFF7106 0.17 +1.4 23,423 - GFF7106 0.17 +1.1 23,770 + GFF7106 0.53 -0.6 23,770 + GFF7106 0.53 +0.0 23,770 + GFF7106 0.53 -0.9 23,770 + GFF7106 0.53 -0.5 23,771 - GFF7106 0.53 -1.6 23,771 - GFF7106 0.53 -0.1 23,771 - GFF7106 0.53 -0.9 23,771 - GFF7106 0.53 -0.7 23,771 - GFF7106 0.53 -0.4 23,909 - GFF7106 0.67 -0.0 23,923 + GFF7106 0.68 -0.4 24,209 - +0.7 24,260 - -0.6 24,347 + +0.4 24,347 + -0.5 24,347 + +0.8 24,348 - +0.2 24,348 - -0.2 24,348 - -1.4 24,366 + -1.0 24,366 + -0.3 24,483 + GFF7107 0.15 -0.6 24,483 + GFF7107 0.15 +0.1 24,483 + GFF7107 0.15 -0.3 24,483 + GFF7107 0.15 +0.1 24,483 + GFF7107 0.15 -0.5 24,484 - GFF7107 0.15 -2.1 24,484 - GFF7107 0.15 -0.5 24,585 + GFF7107 0.21 -0.6 24,586 - GFF7107 0.21 -0.6 24,586 - GFF7107 0.21 -0.3 24,586 - GFF7107 0.21 +0.3 24,586 - GFF7107 0.21 +0.2 24,586 - GFF7107 0.21 -2.0 24,586 - GFF7107 0.21 +0.6 24,609 + GFF7107 0.23 -0.6 24,610 - GFF7107 0.23 -0.7 24,633 + GFF7107 0.24 -0.2 24,633 + GFF7107 0.24 +0.7 24,633 + GFF7107 0.24 -0.6 24,634 - GFF7107 0.24 +0.8 24,634 - GFF7107 0.24 -0.1 24,634 - GFF7107 0.24 +0.0 24,634 - GFF7107 0.24 +0.2 24,634 - GFF7107 0.24 +0.4 24,636 + GFF7107 0.24 -1.5 24,636 + GFF7107 0.24 -1.2 24,636 + GFF7107 0.24 -0.2 24,636 + GFF7107 0.24 -0.1 24,636 + GFF7107 0.24 -0.1 24,636 + GFF7107 0.24 -0.1 24,636 + GFF7107 0.24 -0.3 24,636 + GFF7107 0.24 +0.2 24,636 + GFF7107 0.24 +0.5 24,636 + GFF7107 0.24 -0.8 24,637 - GFF7107 0.24 +0.8 24,637 - GFF7107 0.24 +0.9 24,637 - GFF7107 0.24 -0.3 24,637 - GFF7107 0.24 -0.5 24,637 - GFF7107 0.24 -0.4 24,640 - GFF7107 0.25 +0.3 24,666 + GFF7107 0.26 -0.3 24,666 + GFF7107 0.26 +0.0 24,666 + GFF7107 0.26 +1.0 24,667 - GFF7107 0.26 -0.5 24,687 + GFF7107 0.27 -0.7 24,687 + GFF7107 0.27 -0.9 24,687 + GFF7107 0.27 -0.1 24,688 - GFF7107 0.27 +0.4 24,688 - GFF7107 0.27 -0.6 24,688 - GFF7107 0.27 -0.8 24,821 - GFF7107 0.35 +0.4 24,823 + GFF7107 0.35 -0.1 24,823 + GFF7107 0.35 -0.0 24,823 + GFF7107 0.35 -0.6 24,823 + GFF7107 0.35 -0.5 24,824 - GFF7107 0.36 -0.3 24,824 - GFF7107 0.36 -0.3 24,824 - GFF7107 0.36 -0.5 24,843 + GFF7107 0.37 -0.3 24,843 + GFF7107 0.37 -1.3 24,843 + GFF7107 0.37 +0.6 24,843 + GFF7107 0.37 +1.0 24,844 - GFF7107 0.37 +1.3 24,902 + GFF7107 0.40 -0.1 24,902 + GFF7107 0.40 +0.7 24,902 + GFF7107 0.40 +2.0 24,903 - GFF7107 0.40 -0.3 24,940 - GFF7107 0.42 -0.1 24,940 - GFF7107 0.42 +0.6 25,143 + GFF7107 0.55 -0.3 25,143 + GFF7107 0.55 +0.1 25,143 + GFF7107 0.55 -1.1 25,143 + GFF7107 0.55 +0.8 25,143 + GFF7107 0.55 +0.1 25,143 + GFF7107 0.55 +0.4 25,144 - GFF7107 0.55 -0.2 25,144 - GFF7107 0.55 +1.2 25,144 - GFF7107 0.55 -0.2 25,144 - GFF7107 0.55 +0.2 25,144 - GFF7107 0.55 -0.1 25,182 + GFF7107 0.57 +0.6 25,182 + GFF7107 0.57 -0.0 25,182 + GFF7107 0.57 +1.5 25,182 + GFF7107 0.57 -0.4 25,182 + GFF7107 0.57 +0.3 25,183 - GFF7107 0.57 +1.0 25,183 - GFF7107 0.57 -0.5 25,292 + GFF7107 0.64 +0.2 25,292 + GFF7107 0.64 -0.3 25,293 - GFF7107 0.64 +1.3 25,293 - GFF7107 0.64 +0.3 25,368 + GFF7107 0.68 +0.3 25,524 + GFF7107 0.77 -0.2 25,524 + GFF7107 0.77 -0.2 25,524 + GFF7107 0.77 +0.4 25,524 + GFF7107 0.77 +0.6 25,525 - GFF7107 0.77 -0.3 25,525 - GFF7107 0.77 +0.2 25,525 - GFF7107 0.77 -0.8 25,593 + GFF7107 0.82 -0.4 25,593 + GFF7107 0.82 -1.1 25,593 + GFF7107 0.82 +1.0 25,593 + GFF7107 0.82 +0.3 25,594 - GFF7107 0.82 -0.6 25,651 + GFF7107 0.85 +1.0 25,675 - GFF7107 0.86 -1.3 25,808 + +0.3 25,808 + +0.0 25,808 + +0.5 25,809 - +1.0 25,809 - -0.5 25,809 - -0.4 25,809 - -0.4 25,809 - +1.6 25,809 - -0.4 25,956 + -0.6 25,956 + +0.3 25,957 - -1.2 25,957 - -0.3 25,957 - -0.2 25,957 - -0.6 25,984 + -0.4 25,986 + +1.0 25,997 + +1.0 26,050 + -1.3 26,050 + +0.0
Or see this region's nucleotide sequence