Strain Fitness in Variovorax sp. SCN45 around GFF7003

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
17,950	-				-1.9
17,999	+				-1.5
18,000	-				-0.2
18,721	-				-0.8
18,721	-				-0.1
18,940	+		GFF7003	0.21	+0.6
18,940	+		GFF7003	0.21	+1.5
18,940	+		GFF7003	0.21	-0.9
19,034	-		GFF7003	0.33	-0.4
19,450	+		GFF7003	0.85	+0.2
19,451	-		GFF7003	0.86	-0.3
19,451	-		GFF7003	0.86	-0.1
19,847	+		GFF7004	0.12	-0.5
19,848	-		GFF7004	0.13	-0.1
20,365	+		GFF7004	0.37	+0.4
20,498	+		GFF7004	0.43	-0.7
20,498	+		GFF7004	0.43	-0.2
20,499	-		GFF7004	0.43	+1.0