Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6951 and GFF6952 are separated by 21 nucleotides GFF6952 and GFF6953 are separated by 7 nucleotides
GFF6951 - Alcohol dehydrogenase (EC 1.1.1.1), at 27,140 to 28,129
GFF6951
GFF6952 - Metallo-beta-lactamase family protein, RNA-specific, at 28,151 to 29,503
GFF6952
GFF6953 - Universal stress protein UspA and related nucleotide-binding proteins, at 29,511 to 30,335
GFF6953
Position (kb) 28
29
30 Strain fitness (log2 ratio) -2
-1
0
1
2 at 27.168 kb on + strand at 27.168 kb on + strand at 27.169 kb on - strand at 27.400 kb on - strand, within GFF6951 at 27.459 kb on + strand, within GFF6951 at 27.460 kb on - strand, within GFF6951 at 27.643 kb on + strand, within GFF6951 at 27.644 kb on - strand, within GFF6951 at 27.644 kb on - strand, within GFF6951 at 27.646 kb on - strand, within GFF6951 at 27.646 kb on - strand, within GFF6951 at 27.734 kb on - strand, within GFF6951 at 27.734 kb on - strand, within GFF6951 at 27.734 kb on - strand, within GFF6951 at 27.734 kb on - strand, within GFF6951 at 27.793 kb on + strand, within GFF6951 at 28.049 kb on + strand at 28.050 kb on - strand at 28.368 kb on + strand, within GFF6952 at 28.369 kb on - strand, within GFF6952 at 28.369 kb on - strand, within GFF6952 at 28.650 kb on + strand, within GFF6952 at 28.650 kb on + strand, within GFF6952 at 28.651 kb on - strand, within GFF6952 at 28.659 kb on + strand, within GFF6952 at 28.659 kb on + strand, within GFF6952 at 28.660 kb on - strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.899 kb on + strand, within GFF6952 at 28.899 kb on + strand, within GFF6952 at 28.900 kb on - strand, within GFF6952 at 28.900 kb on - strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.019 kb on - strand, within GFF6952 at 29.019 kb on - strand, within GFF6952 at 29.130 kb on + strand, within GFF6952 at 29.131 kb on - strand, within GFF6952 at 29.131 kb on - strand, within GFF6952 at 29.295 kb on - strand, within GFF6952 at 29.728 kb on + strand, within GFF6953 at 29.729 kb on - strand, within GFF6953 at 29.729 kb on - strand, within GFF6953 at 29.899 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.022 kb on - strand, within GFF6953 at 30.187 kb on + strand, within GFF6953 at 30.187 kb on + strand, within GFF6953
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 27,168 + +0.1 27,168 + -0.6 27,169 - -1.3 27,400 - GFF6951 0.26 +1.1 27,459 + GFF6951 0.32 +0.6 27,460 - GFF6951 0.32 +0.1 27,643 + GFF6951 0.51 -0.5 27,644 - GFF6951 0.51 -0.7 27,644 - GFF6951 0.51 +0.5 27,646 - GFF6951 0.51 +1.2 27,646 - GFF6951 0.51 +1.2 27,734 - GFF6951 0.60 -1.3 27,734 - GFF6951 0.60 -0.6 27,734 - GFF6951 0.60 -0.2 27,734 - GFF6951 0.60 -0.0 27,793 + GFF6951 0.66 -1.2 28,049 + -0.9 28,050 - +0.4 28,368 + GFF6952 0.16 -0.4 28,369 - GFF6952 0.16 +1.0 28,369 - GFF6952 0.16 +1.8 28,650 + GFF6952 0.37 +0.2 28,650 + GFF6952 0.37 -1.1 28,651 - GFF6952 0.37 -0.6 28,659 + GFF6952 0.38 +0.6 28,659 + GFF6952 0.38 -0.5 28,660 - GFF6952 0.38 -1.1 28,878 + GFF6952 0.54 -0.6 28,878 + GFF6952 0.54 -0.5 28,878 + GFF6952 0.54 -0.5 28,879 - GFF6952 0.54 -1.2 28,879 - GFF6952 0.54 +1.4 28,879 - GFF6952 0.54 -1.2 28,899 + GFF6952 0.55 -0.4 28,899 + GFF6952 0.55 -2.0 28,900 - GFF6952 0.55 -0.3 28,900 - GFF6952 0.55 -0.0 29,018 + GFF6952 0.64 -0.7 29,018 + GFF6952 0.64 -0.3 29,018 + GFF6952 0.64 -0.6 29,018 + GFF6952 0.64 -1.3 29,019 - GFF6952 0.64 -0.6 29,019 - GFF6952 0.64 -0.5 29,130 + GFF6952 0.72 -0.8 29,131 - GFF6952 0.72 -0.1 29,131 - GFF6952 0.72 -1.3 29,295 - GFF6952 0.85 +1.0 29,728 + GFF6953 0.26 +0.8 29,729 - GFF6953 0.26 -0.2 29,729 - GFF6953 0.26 -1.4 29,899 + GFF6953 0.47 -0.4 30,019 + GFF6953 0.62 -0.2 30,019 + GFF6953 0.62 +0.1 30,019 + GFF6953 0.62 -0.6 30,019 + GFF6953 0.62 -1.3 30,019 + GFF6953 0.62 -0.7 30,020 - GFF6953 0.62 -0.5 30,020 - GFF6953 0.62 -0.1 30,020 - GFF6953 0.62 +0.6 30,022 - GFF6953 0.62 +0.2 30,187 + GFF6953 0.82 +0.2 30,187 + GFF6953 0.82 -1.0
Or see this region's nucleotide sequence