Strain Fitness in Variovorax sp. SCN45 around GFF6713

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
20,939	+		GFF6712	0.69	-0.1
21,002	+		GFF6712	0.75	-0.3
21,003	-		GFF6712	0.75	-0.0
21,312	+				+0.4
21,313	-				-1.5
21,313	-				-0.5
21,313	-				+1.4
21,313	-				-0.3
21,313	-				-0.5
21,313	-				-0.0
21,313	-				-2.0
21,373	-				+0.1
21,485	-		GFF6713	0.16	-0.3
21,485	-		GFF6713	0.16	-0.7
21,485	-		GFF6713	0.16	-0.2
22,002	+		GFF6713	0.69	-0.6
22,003	-		GFF6713	0.69	-0.5
22,003	-		GFF6713	0.69	-0.7
22,066	-		GFF6713	0.76	-0.8
22,257	+				-0.2
22,258	-				-0.6
22,258	-				+0.2
22,258	-				-0.3
22,269	-				+0.8
22,666	+		GFF6714	0.28	-0.0
22,822	-		GFF6714	0.40	-0.0
22,822	-		GFF6714	0.40	-0.5
22,822	-		GFF6714	0.40	+0.3
22,952	+		GFF6714	0.49	+0.4
22,952	+		GFF6714	0.49	-1.0
22,952	+		GFF6714	0.49	-0.6
22,998	-		GFF6714	0.53	-1.0
22,998	-		GFF6714	0.53	-1.5
23,177	+		GFF6714	0.67	+0.5
23,177	+		GFF6714	0.67	-0.9
23,177	+		GFF6714	0.67	+1.8
23,178	-		GFF6714	0.67	-0.7
23,178	-		GFF6714	0.67	+0.2
23,178	-		GFF6714	0.67	-0.5