Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6705 and GFF6706 are separated by 81 nucleotides GFF6706 and GFF6707 are separated by 0 nucleotides GFF6707 and GFF6708 are separated by 195 nucleotides
GFF6705 - hypothetical protein, at 13,495 to 14,268
GFF6705
GFF6706 - ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92), at 14,350 to 14,976
GFF6706
GFF6707 - RidA/YER057c/UK114 superfamily protein, at 14,977 to 15,366
GFF6707
GFF6708 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 15,562 to 17,142
GFF6708
Position (kb) 14
15 Strain fitness (log2 ratio) -2
-1
0
1
2 at 13.520 kb on + strand at 13.520 kb on + strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.694 kb on - strand, within GFF6705 at 13.694 kb on - strand, within GFF6705 at 13.728 kb on - strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.943 kb on - strand, within GFF6705 at 13.943 kb on - strand, within GFF6705 at 14.050 kb on - strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.252 kb on + strand at 14.252 kb on + strand at 14.253 kb on - strand at 14.253 kb on - strand at 14.253 kb on - strand at 14.285 kb on - strand at 14.430 kb on + strand, within GFF6706 at 14.431 kb on + strand, within GFF6706 at 14.432 kb on - strand, within GFF6706 at 14.432 kb on - strand, within GFF6706 at 14.859 kb on + strand, within GFF6706 at 14.860 kb on - strand, within GFF6706 at 14.993 kb on + strand at 14.993 kb on + strand at 14.993 kb on + strand at 14.993 kb on + strand at 14.994 kb on - strand at 14.994 kb on - strand at 14.994 kb on - strand at 15.077 kb on + strand, within GFF6707 at 15.077 kb on + strand, within GFF6707 at 15.077 kb on + strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.275 kb on + strand, within GFF6707 at 15.276 kb on - strand, within GFF6707 at 15.276 kb on - strand, within GFF6707 at 15.276 kb on - strand, within GFF6707 at 15.276 kb on - strand, within GFF6707 at 15.353 kb on + strand at 15.353 kb on + strand at 15.354 kb on - strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.491 kb on + strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.787 kb on + strand, within GFF6708 at 15.788 kb on - strand, within GFF6708 at 15.788 kb on - strand, within GFF6708 at 15.799 kb on + strand, within GFF6708 at 15.799 kb on + strand, within GFF6708 at 15.799 kb on + strand, within GFF6708 at 15.799 kb on + strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.800 kb on - strand, within GFF6708 at 15.877 kb on + strand, within GFF6708 at 15.877 kb on + strand, within GFF6708 at 15.877 kb on + strand, within GFF6708 at 15.878 kb on - strand, within GFF6708 at 15.878 kb on - strand, within GFF6708 at 15.878 kb on - strand, within GFF6708
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 13,520 + +0.3 13,520 + -1.0 13,521 - -0.1 13,521 - +1.1 13,521 - +1.3 13,521 - -0.4 13,693 + GFF6705 0.26 -1.6 13,693 + GFF6705 0.26 -1.2 13,693 + GFF6705 0.26 +0.3 13,693 + GFF6705 0.26 -1.0 13,693 + GFF6705 0.26 +1.6 13,694 - GFF6705 0.26 -1.3 13,694 - GFF6705 0.26 +0.4 13,728 - GFF6705 0.30 +2.6 13,874 + GFF6705 0.49 -0.2 13,874 + GFF6705 0.49 -0.2 13,874 + GFF6705 0.49 +0.2 13,943 - GFF6705 0.58 +0.1 13,943 - GFF6705 0.58 -0.8 14,050 - GFF6705 0.72 +1.1 14,153 + GFF6705 0.85 -1.6 14,153 + GFF6705 0.85 -1.0 14,153 + GFF6705 0.85 +0.1 14,153 + GFF6705 0.85 +0.7 14,153 + GFF6705 0.85 +2.4 14,153 + GFF6705 0.85 -0.1 14,153 + GFF6705 0.85 -0.0 14,153 + GFF6705 0.85 -1.5 14,154 - GFF6705 0.85 +1.5 14,154 - GFF6705 0.85 +0.1 14,154 - GFF6705 0.85 -0.5 14,154 - GFF6705 0.85 +0.8 14,154 - GFF6705 0.85 -0.2 14,154 - GFF6705 0.85 +0.6 14,154 - GFF6705 0.85 +0.3 14,154 - GFF6705 0.85 +0.5 14,154 - GFF6705 0.85 -0.2 14,154 - GFF6705 0.85 +0.1 14,252 + -0.6 14,252 + -0.9 14,253 - -1.0 14,253 - +0.8 14,253 - +0.5 14,285 - +0.5 14,430 + GFF6706 0.13 +0.6 14,431 + GFF6706 0.13 +0.3 14,432 - GFF6706 0.13 +0.1 14,432 - GFF6706 0.13 -0.3 14,859 + GFF6706 0.81 -0.4 14,860 - GFF6706 0.81 -0.2 14,993 + +0.5 14,993 + +0.5 14,993 + -0.6 14,993 + -0.1 14,994 - +1.4 14,994 - +0.9 14,994 - -0.3 15,077 + GFF6707 0.26 -0.5 15,077 + GFF6707 0.26 -1.2 15,077 + GFF6707 0.26 +0.2 15,078 - GFF6707 0.26 -0.7 15,078 - GFF6707 0.26 -0.6 15,078 - GFF6707 0.26 +0.8 15,078 - GFF6707 0.26 +1.2 15,086 + GFF6707 0.28 -0.0 15,086 + GFF6707 0.28 -0.3 15,086 + GFF6707 0.28 +0.2 15,086 + GFF6707 0.28 -0.7 15,086 + GFF6707 0.28 -0.2 15,086 + GFF6707 0.28 +0.1 15,086 + GFF6707 0.28 -0.6 15,086 + GFF6707 0.28 -1.0 15,086 + GFF6707 0.28 -1.4 15,087 - GFF6707 0.28 +0.1 15,087 - GFF6707 0.28 +0.5 15,087 - GFF6707 0.28 -0.3 15,087 - GFF6707 0.28 +0.8 15,087 - GFF6707 0.28 -0.2 15,087 - GFF6707 0.28 -0.8 15,087 - GFF6707 0.28 -0.9 15,087 - GFF6707 0.28 -0.7 15,087 - GFF6707 0.28 +1.0 15,087 - GFF6707 0.28 +0.2 15,087 - GFF6707 0.28 -0.2 15,087 - GFF6707 0.28 +0.1 15,087 - GFF6707 0.28 -0.5 15,087 - GFF6707 0.28 -0.1 15,087 - GFF6707 0.28 -1.2 15,275 + GFF6707 0.76 -1.1 15,275 + GFF6707 0.76 -1.9 15,275 + GFF6707 0.76 -0.2 15,275 + GFF6707 0.76 -2.0 15,275 + GFF6707 0.76 +0.1 15,275 + GFF6707 0.76 +0.3 15,275 + GFF6707 0.76 +0.2 15,276 - GFF6707 0.77 +0.0 15,276 - GFF6707 0.77 -0.3 15,276 - GFF6707 0.77 +0.2 15,276 - GFF6707 0.77 +0.5 15,353 + +0.8 15,353 + -1.0 15,354 - +0.2 15,491 + -0.5 15,491 + -0.4 15,491 + +0.1 15,491 + +0.1 15,491 + +0.8 15,491 + -0.7 15,491 + -0.2 15,491 + +0.7 15,491 + -0.5 15,491 + -1.3 15,491 + +0.4 15,491 + -0.1 15,491 + +0.7 15,491 + +0.2 15,491 + -0.1 15,492 - -0.6 15,492 - +0.0 15,492 - -2.1 15,492 - -0.4 15,492 - +0.1 15,492 - -1.1 15,492 - -0.2 15,492 - -0.2 15,492 - +2.0 15,492 - +0.6 15,492 - -0.2 15,492 - -1.2 15,492 - -0.0 15,492 - +1.2 15,492 - -1.5 15,492 - -0.3 15,492 - -0.6 15,492 - +0.2 15,492 - -0.9 15,787 + GFF6708 0.14 -0.2 15,788 - GFF6708 0.14 -0.2 15,788 - GFF6708 0.14 -0.9 15,799 + GFF6708 0.15 +0.3 15,799 + GFF6708 0.15 +0.2 15,799 + GFF6708 0.15 +0.7 15,799 + GFF6708 0.15 -0.4 15,800 - GFF6708 0.15 -0.5 15,800 - GFF6708 0.15 -0.3 15,800 - GFF6708 0.15 -0.2 15,800 - GFF6708 0.15 +0.2 15,800 - GFF6708 0.15 -0.6 15,800 - GFF6708 0.15 -0.2 15,800 - GFF6708 0.15 +0.8 15,877 + GFF6708 0.20 +0.1 15,877 + GFF6708 0.20 -1.9 15,877 + GFF6708 0.20 +0.2 15,878 - GFF6708 0.20 -0.4 15,878 - GFF6708 0.20 -0.6 15,878 - GFF6708 0.20 +0.2
Or see this region's nucleotide sequence