Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6308 and GFF6309 are separated by 25 nucleotides GFF6309 and GFF6310 are separated by 7 nucleotides GFF6310 and GFF6311 are separated by 82 nucleotides GFF6311 and GFF6312 are separated by 135 nucleotides
GFF6308 - no description, at 98,259 to 98,534
GFF6308
GFF6309 - Secreted and surface protein containing fasciclin-like repeats, at 98,560 to 99,138
GFF6309
GFF6310 - Transcriptional regulator, LysR family, at 99,146 to 100,072
GFF6310
GFF6311 - hypothetical protein, at 100,155 to 100,487
GFF6311
GFF6312 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 100,623 to 101,801
GFF6312
Position (kb) 99
100
101 Strain fitness (log2 ratio) -2
-1
0
1
2 at 98.421 kb on + strand, within GFF6308 at 98.477 kb on + strand, within GFF6308 at 98.477 kb on + strand, within GFF6308 at 98.477 kb on + strand, within GFF6308 at 98.478 kb on - strand, within GFF6308 at 98.686 kb on + strand, within GFF6309 at 98.686 kb on + strand, within GFF6309 at 98.686 kb on + strand, within GFF6309 at 98.686 kb on + strand, within GFF6309 at 98.686 kb on + strand, within GFF6309 at 98.687 kb on - strand, within GFF6309 at 98.687 kb on - strand, within GFF6309 at 98.687 kb on - strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.905 kb on + strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 98.906 kb on - strand, within GFF6309 at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.085 kb on + strand at 99.086 kb on - strand at 99.086 kb on - strand at 99.086 kb on - strand at 99.086 kb on - strand at 99.086 kb on - strand at 99.240 kb on + strand, within GFF6310 at 99.243 kb on + strand, within GFF6310 at 99.243 kb on + strand, within GFF6310 at 99.243 kb on + strand, within GFF6310 at 99.243 kb on + strand, within GFF6310 at 99.243 kb on + strand, within GFF6310 at 99.244 kb on - strand, within GFF6310 at 99.244 kb on - strand, within GFF6310 at 99.376 kb on - strand, within GFF6310 at 99.376 kb on - strand, within GFF6310 at 99.477 kb on + strand, within GFF6310 at 99.477 kb on + strand, within GFF6310 at 99.478 kb on - strand, within GFF6310 at 100.098 kb on + strand at 100.098 kb on + strand at 100.098 kb on + strand at 100.098 kb on + strand at 100.099 kb on - strand at 100.099 kb on - strand at 100.099 kb on - strand at 100.099 kb on - strand at 100.118 kb on + strand at 100.118 kb on + strand at 100.118 kb on + strand at 100.118 kb on + strand at 100.118 kb on + strand at 100.118 kb on + strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.119 kb on - strand at 100.120 kb on + strand at 100.120 kb on + strand at 100.120 kb on + strand at 100.120 kb on + strand at 100.120 kb on + strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.121 kb on - strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.635 kb on + strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.723 kb on + strand at 100.723 kb on + strand at 100.723 kb on + strand at 100.723 kb on + strand at 100.723 kb on + strand at 100.724 kb on - strand at 100.724 kb on - strand at 100.724 kb on - strand at 100.724 kb on - strand at 100.724 kb on - strand at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.037 kb on + strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.038 kb on - strand, within GFF6312 at 101.061 kb on - strand, within GFF6312
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 98,421 + GFF6308 0.59 +0.3 98,477 + GFF6308 0.79 -0.5 98,477 + GFF6308 0.79 +0.4 98,477 + GFF6308 0.79 -0.4 98,478 - GFF6308 0.79 +0.2 98,686 + GFF6309 0.22 -0.1 98,686 + GFF6309 0.22 +0.8 98,686 + GFF6309 0.22 -0.6 98,686 + GFF6309 0.22 -0.0 98,686 + GFF6309 0.22 -0.2 98,687 - GFF6309 0.22 -1.0 98,687 - GFF6309 0.22 +2.0 98,687 - GFF6309 0.22 -0.8 98,905 + GFF6309 0.60 +0.6 98,905 + GFF6309 0.60 +0.3 98,905 + GFF6309 0.60 -0.3 98,905 + GFF6309 0.60 +0.4 98,905 + GFF6309 0.60 +0.4 98,905 + GFF6309 0.60 -0.6 98,905 + GFF6309 0.60 +0.4 98,905 + GFF6309 0.60 -0.3 98,906 - GFF6309 0.60 +0.6 98,906 - GFF6309 0.60 +0.5 98,906 - GFF6309 0.60 -0.2 98,906 - GFF6309 0.60 +0.3 98,906 - GFF6309 0.60 +0.4 98,906 - GFF6309 0.60 -0.4 98,906 - GFF6309 0.60 +1.4 98,906 - GFF6309 0.60 +0.9 98,906 - GFF6309 0.60 -2.7 98,906 - GFF6309 0.60 -0.7 98,906 - GFF6309 0.60 -1.2 98,906 - GFF6309 0.60 -0.4 98,906 - GFF6309 0.60 -0.0 99,085 + +1.0 99,085 + -0.7 99,085 + +0.0 99,085 + -0.6 99,085 + +0.1 99,085 + -0.5 99,085 + +0.0 99,085 + -0.2 99,086 - +0.1 99,086 - -0.8 99,086 - -0.6 99,086 - -0.4 99,086 - +1.1 99,240 + GFF6310 0.10 +0.9 99,243 + GFF6310 0.10 -1.4 99,243 + GFF6310 0.10 -0.0 99,243 + GFF6310 0.10 +0.5 99,243 + GFF6310 0.10 -0.8 99,243 + GFF6310 0.10 -0.2 99,244 - GFF6310 0.11 +0.2 99,244 - GFF6310 0.11 -0.3 99,376 - GFF6310 0.25 -0.0 99,376 - GFF6310 0.25 +0.3 99,477 + GFF6310 0.36 +0.4 99,477 + GFF6310 0.36 +0.8 99,478 - GFF6310 0.36 -0.1 100,098 + +0.2 100,098 + +0.1 100,098 + -1.6 100,098 + +0.4 100,099 - -0.4 100,099 - +0.5 100,099 - -1.1 100,099 - +0.4 100,118 + -1.0 100,118 + -1.4 100,118 + -0.1 100,118 + +1.1 100,118 + -1.7 100,118 + -0.0 100,119 - +1.2 100,119 - +0.7 100,119 - -0.0 100,119 - -0.3 100,119 - +0.2 100,119 - -1.0 100,119 - -0.7 100,119 - -0.5 100,119 - -1.3 100,120 + +0.4 100,120 + +0.4 100,120 + +0.2 100,120 + -0.0 100,120 + +0.4 100,121 - +0.4 100,121 - -0.3 100,121 - +0.3 100,121 - +0.7 100,121 - -1.4 100,121 - -0.6 100,121 - -0.0 100,121 - +0.4 100,121 - -0.7 100,121 - -0.7 100,121 - -2.1 100,635 + -0.7 100,635 + -0.5 100,635 + +0.6 100,635 + -1.1 100,635 + +0.2 100,635 + -0.0 100,635 + +0.2 100,635 + +1.0 100,635 + -0.1 100,635 + +1.6 100,635 + -0.5 100,635 + -0.9 100,635 + -0.7 100,635 + +0.4 100,635 + -0.8 100,635 + +0.5 100,635 + +0.5 100,635 + +0.2 100,635 + -0.0 100,635 + -0.4 100,635 + -0.3 100,635 + -0.4 100,635 + -1.2 100,635 + -0.5 100,635 + -0.7 100,635 + +0.4 100,635 + +1.0 100,635 + -0.0 100,635 + +0.4 100,635 + -1.6 100,635 + +0.9 100,635 + +0.1 100,635 + -0.1 100,635 + -0.3 100,635 + -0.4 100,635 + +1.2 100,635 + +0.8 100,635 + -0.8 100,635 + -1.8 100,635 + +0.2 100,635 + +0.5 100,635 + +0.2 100,635 + -0.6 100,635 + -0.2 100,635 + -0.1 100,635 + -0.3 100,635 + -0.4 100,635 + -0.2 100,635 + -0.5 100,635 + -1.4 100,635 + -0.2 100,635 + +0.3 100,635 + -0.4 100,636 - +0.4 100,636 - -0.3 100,636 - -1.6 100,636 - -0.7 100,636 - -0.5 100,636 - +1.1 100,636 - -0.5 100,636 - -0.5 100,636 - +0.4 100,636 - -0.2 100,636 - -0.9 100,636 - -0.3 100,636 - +0.1 100,636 - +0.8 100,636 - -1.8 100,636 - +0.6 100,636 - +0.7 100,636 - -0.6 100,636 - -0.8 100,636 - +0.4 100,636 - -0.3 100,636 - -0.3 100,636 - -0.0 100,636 - -2.1 100,636 - -0.4 100,636 - -0.4 100,636 - +1.0 100,636 - -1.8 100,636 - +0.6 100,636 - -0.4 100,636 - +0.2 100,636 - +0.4 100,636 - +1.0 100,636 - +0.9 100,636 - -0.4 100,636 - +1.1 100,636 - -0.9 100,636 - -0.0 100,636 - -0.3 100,636 - +2.0 100,636 - -0.2 100,636 - -0.7 100,636 - -0.9 100,636 - +0.3 100,636 - +0.2 100,636 - -0.8 100,636 - +0.0 100,636 - -2.0 100,636 - -0.2 100,636 - -0.8 100,636 - +1.4 100,636 - -0.9 100,636 - +0.3 100,636 - +1.0 100,636 - +0.1 100,636 - +1.0 100,636 - +0.1 100,636 - +0.3 100,636 - -0.3 100,636 - -0.7 100,636 - -1.4 100,636 - +0.1 100,636 - -1.1 100,636 - -1.0 100,636 - -0.4 100,723 + -1.5 100,723 + +0.6 100,723 + -0.0 100,723 + +1.0 100,723 + -0.2 100,724 - -0.6 100,724 - -0.5 100,724 - +0.2 100,724 - +0.2 100,724 - +0.7 101,037 + GFF6312 0.35 -0.1 101,037 + GFF6312 0.35 +1.6 101,037 + GFF6312 0.35 +2.4 101,037 + GFF6312 0.35 -0.2 101,037 + GFF6312 0.35 +0.6 101,037 + GFF6312 0.35 -0.5 101,037 + GFF6312 0.35 -0.8 101,037 + GFF6312 0.35 -0.9 101,037 + GFF6312 0.35 +0.8 101,037 + GFF6312 0.35 -0.5 101,037 + GFF6312 0.35 -1.0 101,037 + GFF6312 0.35 -0.0 101,037 + GFF6312 0.35 +0.3 101,037 + GFF6312 0.35 +0.0 101,037 + GFF6312 0.35 -0.2 101,037 + GFF6312 0.35 +1.0 101,037 + GFF6312 0.35 -0.9 101,037 + GFF6312 0.35 +0.9 101,037 + GFF6312 0.35 -0.1 101,037 + GFF6312 0.35 -0.2 101,037 + GFF6312 0.35 -0.6 101,037 + GFF6312 0.35 +1.7 101,037 + GFF6312 0.35 +0.6 101,037 + GFF6312 0.35 -0.4 101,037 + GFF6312 0.35 -0.2 101,037 + GFF6312 0.35 +0.0 101,038 - GFF6312 0.35 -0.7 101,038 - GFF6312 0.35 -0.6 101,038 - GFF6312 0.35 +0.1 101,038 - GFF6312 0.35 -1.5 101,038 - GFF6312 0.35 -0.6 101,038 - GFF6312 0.35 -0.2 101,038 - GFF6312 0.35 +0.4 101,038 - GFF6312 0.35 +0.0 101,038 - GFF6312 0.35 -0.3 101,038 - GFF6312 0.35 -0.7 101,038 - GFF6312 0.35 -0.9 101,038 - GFF6312 0.35 -0.0 101,038 - GFF6312 0.35 +0.2 101,038 - GFF6312 0.35 -0.0 101,038 - GFF6312 0.35 -0.1 101,038 - GFF6312 0.35 -0.3 101,038 - GFF6312 0.35 +0.1 101,038 - GFF6312 0.35 -0.4 101,038 - GFF6312 0.35 -0.4 101,038 - GFF6312 0.35 +0.3 101,038 - GFF6312 0.35 -0.7 101,038 - GFF6312 0.35 +0.6 101,038 - GFF6312 0.35 -0.9 101,038 - GFF6312 0.35 -0.3 101,038 - GFF6312 0.35 -0.1 101,038 - GFF6312 0.35 +0.1 101,038 - GFF6312 0.35 +0.1 101,038 - GFF6312 0.35 -1.2 101,038 - GFF6312 0.35 -0.3 101,038 - GFF6312 0.35 -0.8 101,038 - GFF6312 0.35 -0.8 101,038 - GFF6312 0.35 +1.0 101,038 - GFF6312 0.35 +0.0 101,038 - GFF6312 0.35 +1.0 101,061 - GFF6312 0.37 -0.2
Or see this region's nucleotide sequence