Experiment: M9 with calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6142 and GFF6143 overlap by 4 nucleotides GFF6143 and GFF6144 are separated by 178 nucleotides
GFF6142 - 2-aminoethylphosphonate ABC transporter permease protein, at 45,290 to 47,023
GFF6142
GFF6143 - 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1), at 47,020 to 48,156
GFF6143
GFF6144 - 2-aminoethylphosphonate ABC transporter substrate-binding protein, at 48,335 to 49,375
GFF6144
Position (kb) 47
48
49 Strain fitness (log2 ratio) -2
-1
0
1
2 at 46.032 kb on + strand, within GFF6142 at 46.129 kb on - strand, within GFF6142 at 46.179 kb on + strand, within GFF6142 at 46.180 kb on - strand, within GFF6142 at 46.341 kb on + strand, within GFF6142 at 46.341 kb on + strand, within GFF6142 at 46.342 kb on - strand, within GFF6142 at 46.377 kb on + strand, within GFF6142 at 46.450 kb on - strand, within GFF6142 at 46.515 kb on + strand, within GFF6142 at 46.548 kb on + strand, within GFF6142 at 46.548 kb on + strand, within GFF6142 at 46.549 kb on - strand, within GFF6142 at 46.711 kb on - strand, within GFF6142 at 46.809 kb on + strand, within GFF6142 at 46.810 kb on - strand, within GFF6142 at 47.282 kb on + strand, within GFF6143 at 47.441 kb on + strand, within GFF6143 at 47.441 kb on + strand, within GFF6143 at 47.442 kb on - strand, within GFF6143 at 47.717 kb on + strand, within GFF6143 at 47.718 kb on - strand, within GFF6143 at 47.718 kb on - strand, within GFF6143 at 47.855 kb on + strand, within GFF6143 at 47.855 kb on + strand, within GFF6143 at 48.151 kb on - strand at 48.336 kb on + strand at 48.336 kb on + strand at 48.441 kb on + strand, within GFF6144 at 48.441 kb on + strand, within GFF6144 at 48.441 kb on + strand, within GFF6144 at 48.442 kb on - strand, within GFF6144 at 48.442 kb on - strand, within GFF6144 at 48.483 kb on + strand, within GFF6144 at 48.750 kb on + strand, within GFF6144 at 48.751 kb on - strand, within GFF6144 at 48.751 kb on - strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.783 kb on + strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.784 kb on - strand, within GFF6144 at 48.837 kb on + strand, within GFF6144 at 48.838 kb on - strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.885 kb on + strand, within GFF6144 at 48.886 kb on - strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.020 kb on + strand, within GFF6144 at 49.057 kb on - strand, within GFF6144
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL remove 46,032 + GFF6142 0.43 -1.5 46,129 - GFF6142 0.48 +0.1 46,179 + GFF6142 0.51 +1.3 46,180 - GFF6142 0.51 -2.2 46,341 + GFF6142 0.61 -0.5 46,341 + GFF6142 0.61 -0.7 46,342 - GFF6142 0.61 -1.0 46,377 + GFF6142 0.63 +0.6 46,450 - GFF6142 0.67 -2.0 46,515 + GFF6142 0.71 -0.9 46,548 + GFF6142 0.73 +0.2 46,548 + GFF6142 0.73 -0.5 46,549 - GFF6142 0.73 +0.5 46,711 - GFF6142 0.82 +2.2 46,809 + GFF6142 0.88 -0.0 46,810 - GFF6142 0.88 -0.4 47,282 + GFF6143 0.23 -1.7 47,441 + GFF6143 0.37 -0.7 47,441 + GFF6143 0.37 +1.0 47,442 - GFF6143 0.37 -0.2 47,717 + GFF6143 0.61 -0.5 47,718 - GFF6143 0.61 -1.3 47,718 - GFF6143 0.61 -0.3 47,855 + GFF6143 0.73 +0.0 47,855 + GFF6143 0.73 +1.1 48,151 - -0.0 48,336 + +1.2 48,336 + -0.7 48,441 + GFF6144 0.10 -0.2 48,441 + GFF6144 0.10 -0.7 48,441 + GFF6144 0.10 +0.0 48,442 - GFF6144 0.10 -0.3 48,442 - GFF6144 0.10 -0.5 48,483 + GFF6144 0.14 -0.5 48,750 + GFF6144 0.40 +1.2 48,751 - GFF6144 0.40 +0.2 48,751 - GFF6144 0.40 -0.3 48,783 + GFF6144 0.43 -0.0 48,783 + GFF6144 0.43 -0.2 48,783 + GFF6144 0.43 -0.2 48,784 - GFF6144 0.43 -1.7 48,784 - GFF6144 0.43 -1.9 48,784 - GFF6144 0.43 +0.3 48,784 - GFF6144 0.43 -0.7 48,837 + GFF6144 0.48 -0.5 48,838 - GFF6144 0.48 -0.5 48,885 + GFF6144 0.53 +0.4 48,885 + GFF6144 0.53 -0.5 48,885 + GFF6144 0.53 +0.2 48,885 + GFF6144 0.53 +1.0 48,886 - GFF6144 0.53 -0.2 49,020 + GFF6144 0.66 -0.4 49,020 + GFF6144 0.66 -0.2 49,020 + GFF6144 0.66 +0.3 49,057 - GFF6144 0.69 -0.4
Or see this region's nucleotide sequence