Strain Fitness in Variovorax sp. SCN45 around GFF6019

Experiment: M9 with calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL
78,063	+				+0.5
78,076	-				+0.2
78,416	+		GFF6018	0.31	-1.0
78,417	-		GFF6018	0.31	-0.3
78,417	-		GFF6018	0.31	-0.1
79,044	+				+0.3
79,044	+				-0.0
79,149	+		GFF6019	0.13	-2.1
79,149	+		GFF6019	0.13	-0.0
79,150	-		GFF6019	0.13	-0.2
79,242	+		GFF6019	0.24	-2.3
79,242	+		GFF6019	0.24	-0.4
79,242	+		GFF6019	0.24	-0.9
79,242	+		GFF6019	0.24	-1.1
79,242	+		GFF6019	0.24	-0.0
79,243	-		GFF6019	0.24	-0.4
79,243	-		GFF6019	0.24	-0.2
79,243	-		GFF6019	0.24	-0.8
79,243	-		GFF6019	0.24	+0.0
79,243	-		GFF6019	0.24	-2.0
79,318	-		GFF6019	0.33	+0.5
79,318	-		GFF6019	0.33	-0.1
79,318	-		GFF6019	0.33	-0.5
79,324	-		GFF6019	0.33	-0.9
79,660	-		GFF6019	0.73	-0.4
79,943	+				-0.7
79,996	+		GFF6020	0.14	+0.2
80,054	+		GFF6020	0.22	+0.5
80,054	+		GFF6020	0.22	+0.1
80,054	+		GFF6020	0.22	-0.2
80,054	+		GFF6020	0.22	-0.2
80,055	-		GFF6020	0.22	-0.6
80,055	-		GFF6020	0.22	-1.1
80,055	-		GFF6020	0.22	-0.8
80,055	-		GFF6020	0.22	+0.1
80,055	-		GFF6020	0.22	-1.1
80,132	+		GFF6020	0.32	+0.5
80,133	-		GFF6020	0.32	+0.2
80,133	-		GFF6020	0.32	-0.2
80,226	-		GFF6020	0.44	-1.0
80,276	+		GFF6020	0.50	-0.9
80,277	-		GFF6020	0.50	-0.1
80,394	-		GFF6020	0.65	-0.7
80,630	+				-0.5
80,630	+				+0.3
80,631	-				-0.8
80,676	+				+0.7